SimpleSearch - Line and FST details


Line specific information

 
Line ID 284A04
Vector Used pAC161
Line Availability available as T3 set from NASC (N427172)
Segregation Analysis 50:50:44
Confirmed for Hit At1g32100
Parent of DUPLO pair none
Parent of pair(s) 2609, 92398, 92401

Gene hit At1g32100

 
Sequence (A. th genome BLAST matches underlined) 
>25-K015276-022-284-A04-8409
NTGATCCATGGTAGATTTCCCGGACATGAANGCCTTTACAATTGAATATATTTGAAAAAT
ATAGCCCATCAACTTTATTTGATTTCTTTTACATGTATGTAGAAATGGAGATTCCACACC
AAGCAGGGATAGGACATTTCTATCACACTTTTCTATGAAGGATGTCTCACTGATCACGAA
GTCGGAGAAGACGAAGAAGCTTCTATGGGATCCTCCC
GenBank Accession AL944682 [GenBank]
Graphic View Graphic view of gene At1g32100
Predicted Position of Insertion Chr1:11546686 - go to primer design
BLAST e Value 9e-79
Hit Clone Code (BAC ID) F3C3
Hit Gene Code At1g32100 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation pinoresinol reductase 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g55510

 
Sequence (A. th genome BLAST matches underlined) 
>25-K015289-022-284-A04-8409
TTGATCCATCGTAGATTTCCCGGACATGAAGCACTCTTACAAAAATTGTAATTGTCTAAA
ATATACTCATTTACCCTCATACTTTAAATGATGTAGTAAAACCTGTATAAATTAATATGG
TTGTTAACATATATAAACTCATTGTTCATATTTTAAGAAATTATGCATATAGATTCAACG
ATTTCCTATGGGATCCTCCCTATAGTGAG
GenBank Accession AL944683 [GenBank]
Graphic View Graphic view of gene At1g55510
Predicted Position of Insertion Chr1:20723059 - go to primer design
BLAST e Value 1e-81
Hit Clone Code (BAC ID) T5A14
Hit Gene Code At1g55510 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation branched-chain alpha-keto acid decarboxylase E1 beta subunit
Insertion Classification Promoter
Confirmation Status unknown


Last Updated on 10.06.2021 13:37