SimpleSearch - Line and FST details


Line specific information

 
Line ID 284H09
Vector Used pAC161
Line Availability available as T3 set from NASC (N427261)
Segregation Analysis 50:47:38
Confirmed for Hit At3g55770
Parent of DUPLO pair none
Parent of pair(s) 4382, 4407

Gene hit At3g55770

 
Sequence (A. th genome BLAST matches underlined) 
>72-K015289-022-284-H09-8409
NTGATCCATGTAGATTNTCCCGGACATTGAAGCCTTTACAATTGAATATATCACTCAGAA
ATGCAGGGTCTTGTGAGAAGACTGTTTATGCTGTTGAGCTTCTCTCTGCTGATGGAGTCG
GATATCACATGGTCTTGCATGAAATGCACTCACTAGAAAAAGCAGGCTTCAGGTACTGAT
TCTATCATCTTTGTATACATGTTAGCGATGCGTGCTTTAATTAGTAGGAATGAGAATACC
GAATCTACCCATCTTCTTGCTTAAATGATGAATTGAATGTCTATTGTAACCATAAGCAGC
TCTTGATAAAGTAAATGTCTTTTTACAGCTGAGTAGTTACTCATCAATGGAAGGTGTTTT
GTACTGTAAGCCTCATTTTGAGCAGCTCTTTAAGGAGAGTGGTAGTTTCAACAAGAACTT
TCAGTCACGTATGTAGTTTTGCTTCTGCTTCGATTCATGTTTTTTTTCCGCTTGCCCTTC
TTTTGGTTATTGATTTAATCAGTCTTGCAACTTTGTTTCCTCACAGCTGCAAAATCGGCT
GACAAATCAACTCCTGAGCTGGTAAATGTTTCTTTTCTGGTGTGGCCAGATGCTCTTTGC
ATACATTTTCTGATGGAACTTTTCTCTTATATTTCCTT
GenBank Accession AL944794 [GenBank]
Graphic View Graphic view of gene At3g55770
Predicted Position of Insertion Chr3:20703820 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F1I16
Hit Gene Code At3g55770 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation GATA type zinc finger transcription factor family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL944793 [GenBank]


Last Updated on 10.06.2021 13:37