SimpleSearch - Line and FST details


Line specific information

 
Line ID 285E04
Vector Used pAC161
Line Availability available as T3 set from NASC (N427316)
Segregation Analysis 50:44:33
Confirmed for Hit At4g27960
Parent of DUPLO pair none
Parent of pair(s) 35241, 80814, 80821, 80822, 80823, 80825

Gene hit At4g27960

 
Sequence (A. th genome BLAST matches underlined) 
>29-K015290-022-285-E04-8409
NTGATCCATGTAGATTTCCCGGACATGAATCCTTTACGATACAACCCAACGATCCTTTGC
TCCCTCTGATGCACCCACGTACTTGATGACACCAGCAGAGCCGAGCTGCCTGATATGGCC
TGTATCCGATAGATATCCATGAAGATCACACGAATACTGTGCTTATTGAGAAACCCTGAC
TCCACTGCTCTCTTTATATGTATGGGCTGAATGCTTACTATTAGCTGTTATGGCTTAGTA
TGGAACGCCTTCACCCGTAAAAGCCACCTACATTTTGTGCTACATCCTACGTAGAGAGCA
ATGATATCTCAACCTCCCAGATGCTAGCTTTTATATGCGATGTGCCATATCATCTACGTA
TATATGATGGCCGATATTATGTTGGATTATATATTGTCCGAAGACCAAGCTGCTGTATAC
ATTTGTATATACCTTAGGAGGCTTAAATGGGTAATCTGGAGGGAAATGGATGGTTACAAG
AAAAACTCCTCCAGAATAAGGCTATCCGATGGACCCATTATAGTGGCCTGCCAATGAAAC
ATGTCTTCCGCAACGGGTCCTGTCAACATTTAACCAAAACTTCAATACCAAACCAGAAAA
GCAACAACATGCATATTAAGAAGAAGTTGGTAAAAGGGGGCANAATTANAAGAGAACAAC
CGAGTTTATATCCTAAGATCTCATCCAAGGAAATCCAAAAATGAAACCCGATCTATCACC
GAGCAAACAAGTTTGAACATTGACCTTTATGATTCATTCCTA
GenBank Accession AL944881 [GenBank]
Graphic View Graphic view of gene At4g27960
Predicted Position of Insertion Chr4:13916199 - go to primer design
BLAST e Value 1e-158
Hit Clone Code (BAC ID) T13J8
Hit Gene Code At4g27960 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ubiquitin conjugating enzyme 9
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL944880 [GenBank]


Last Updated on 10.06.2021 13:37