SimpleSearch - Line and FST details


Line specific information

 
Line ID 285E05
Vector Used pAC161
Line Availability available as T3 set from NASC (N427317)
Segregation Analysis 100:92:75
Confirmed for Hit At3g59100
Parent of DUPLO pair none
Parent of pair(s) none
Note

Gene hit At3g59100

 
Sequence (A. th genome BLAST matches underlined) 
>37-K015290-022-285-E05-8409
NTGATCCATGTAGAATTTCCCGGACATGAANGCCTTTACAATTGAATATATCCTTTGAAT
ATAATATTATTAAAGACCATATGTCAAAATCATTGTGATAACTACAACACATGAGTGTGA
TGAGAGTGTGAGGTGTCCAAGTCCAACCAAACTAAAATATCCCTATAACCTTATAGACAT
CTATTGAACTACGCTAAAACGACACCGTTCTAAAGAAGCAGGTTTGTTGCTTAAGACAGA
AGAAACCCGGAAACAACACTGAGTATTTATGGTTTTACTTGTGCGAAGAAGTTGCTTTGT
CTTTCCGACCAGCGAGAATCATAGAGATTTGAAGGCCTCTGCTAAAAGCTTGATTGAAAA
GCAGACGAGCTTGAAACTCGGAGACAATGGGAAACCAAGACAGAACAGCGATTGGTGCAA
AGATTACAAGTCCCATGATATTCTCATACGCTCTTCCTATGGGATCCT
GenBank Accession AL944883 [GenBank]
Graphic View Graphic view of gene At3g59100
Predicted Position of Insertion Chr3:21854076 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F17J16
Hit Gene Code At3g59100 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation glucan synthase-like 11
Insertion Classification TS2TE (3')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At3g57880

 
Sequence (A. th genome BLAST matches underlined) 
>37-K015277-022-285-E05-8409
TGCCGGGATCGATCATATAGCAATCGCGGGTGAACCGTCAGCTCGTACCAGGATTCTTGC
CTTATGTGATCTCGCAGTACATCCACTCACCTATGGGATCCTCTCTATATGTGAGTGTAC
AGCTAGAAACGATTGTTCAACTTCTAATCCACTATCTGGGCGTACTTAGCACACATTATG
CATCAGCAGTTACCAAGCCGTATTTGGATCTATATGCATAAAACCTGCAGCATTCAATAA
CCCCAACTCCAGTACACCAATATTAAGCTTCCATAATAGCTTCGCTGCTGGGCTAAGATC
ACTGCTGAAATGCGTACGACTCATCGACAACGTGACACCCTCCTTCCAAACATATACTCA
TGTGAATGCTGCTATGGCATCCTCCATAAATTGAGCATACGCTCTTCCTAGGGGATCCTA
CCTA
GenBank Accession AL944882 [GenBank]
Graphic View Graphic view of gene At3g57880
Predicted Position of Insertion Chr3:21432181 - go to primer design
BLAST e Value 2e-42
Hit Clone Code (BAC ID) T10K17
Hit Gene Code At3g57880 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein
Insertion Classification CDSi
Confirmation Status failed, line belongs to a contamination group, please check line 285E06


Last Updated on 10.06.2021 13:37