SimpleSearch - Line and FST details


Line specific information

 
Line ID 285F11
Vector Used pAC161
Line Availability available as T3 set from NASC (N427335)
Segregation Analysis 50:35:32
Confirmed for Hit At2g46380
Parent of DUPLO pair 2522
Parent of pair(s) none

Gene hit At2g46380

 
Sequence (A. th genome BLAST matches underlined) 
>86-K015277-022-285-F11-8409
TGATCCATGGTAGATTTCCCGGACCATGAAGCCTTTACATTTAAGAGATTCTTGCACTTG
GGACATCGAACCAGCCTTGCTTCGATCGTTGACGACTCAGCCATTACAAACAAACGAAAA
TAGTCACTGAGCTGACAAGAAAGATACTCAGCATTCAATTAAAGAAGAAAAACCAAGAAG
ACTTAAGAAGCTATGGGATCCTCCCT
GenBank Accession AL944910 [GenBank]
Graphic View Graphic view of gene At2g46380
Predicted Position of Insertion Chr2:19039439 - go to primer design
BLAST e Value 2e-80
Hit Clone Code (BAC ID) F11C10
Hit Gene Code At2g46380 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation extra-large G-like protein, putative (DUF3133)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit MWF20

 
Sequence (A. th genome BLAST matches underlined) 
>86-K015290-022-285-F11-8409
NTGATCCATGTAGATTNTCCCGGACATTGAAGCCTTTACAATCGAATATATGCTGATTTC
TTGAAAGGGGCAGGTAAGTGTATTGAAAGATAGATGATGACTGAAACATAAAATGCGTAC
TTATTAATCTATATTAAATTCCTTAATCTAATGCCAATATTAATTAACTTTCACTATGGG
ATCGCTCCCTTCACTGAGCCAGTTTCAGATTCTGTTTTTTTTTTTACCATGACGTCCATT
AGGTAAGGGGTAAAAAAATTTTGACCCAAAAAAGTTTTTGTTTGTTGGTTTTGTTTTTAT
GTTTGAAAACCCAAAAACAAGGCCCGGGAACCTTTTTTTTTGTCGGTTAATTCCCTTGAA
AATAAATCCAAAAAAATTGGAGTTCCCTCTGGCTCAAGGGAAAAAAAACCTCATCCCAGT
GCTTCTTTAAAACCCCAACAAAATGGTCCACCTGAAACTTGGGATTTTCACATGGATCCT
CT
GenBank Accession AL944911 [GenBank]
Graphic View Graphic view of sequence AL944911 of line 285F11
Predicted Position of Insertion Chr5:17429461 - go to primer design
BLAST e Value 4e-19
Hit Clone Code (BAC ID) MWF20
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37