SimpleSearch - Line and FST details


Line specific information

 
Line ID 286D03
Vector Used pAC161
Line Availability available as T3 set from NASC (N427399)
Segregation Analysis 50:39:36
Confirmed for Hit At5g54920
Parent of DUPLO pair 11731
Parent of pair(s) none

Gene hit At5g54920

 
Sequence (A. th genome BLAST matches underlined) 
>20-K015494-022-286-D03-8409
NTTTTGATCCATGTAGTATTTCCCGGACATGAAGGCACTTACAATTGGTAATTCTGGTTT
CTATGGCACAAAGTTTCTATAGAAAGTCTTGTTTTTCATCTTCATTACCTTATTATTTGC
CTCCCAGCTTAATAAGTTTTTGATACATAGTTAAAAACCAAAAATTATAGATCCGTCTGA
TGACTTGGATTTTTTTTCTTTCTCAATGATATACAACTACTAGCTAAAGAAAACAGAAAG
AGGAAGTTATGAGCATTTTATATAATGAATCACGATAATTTTGCTGACATCTTTAAGCTA
TGGGATCCTCCCTTAANGGGGAGATNNNNGCGCATCGGCTCTGGGACCANTCGTTGCATG
GGGAACGTGCATGAGAGCGCTATCCCGCTTATGATATTATGAGGAGAATATGCGAGCCGG
CATAAANCCAGGGGGCATCGGGCTGGGTAGGTGAATTTCTCCAGACCACGGGAACGCTCC
GTTTACTGGGGAGAGATCATGACGCAATCAGGGACCCCTTGTGGGGCCGATGACCGCTTG
TCGCATCGAGGTGGAGAAACT
GenBank Accession AL945005 [GenBank]
Graphic View Graphic view of gene At5g54920
Predicted Position of Insertion Chr5:22305549 - go to primer design
BLAST e Value 3e-122
Hit Clone Code (BAC ID) MBG8
Hit Gene Code At5g54920 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation polyadenylate-binding protein interacting protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37