SimpleSearch - Line and FST details


Line specific information

 
Line ID 286G11
Vector Used pAC161
Line Availability available as T3 set from NASC (N427443)
Segregation Analysis 50:39:28
Confirmed for Hit At1g72570
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At1g72570

 
Sequence (A. th genome BLAST matches underlined) 
>87-K015494-022-286-G11-8409
TTGATCCATGGTAGATTTCCCGGACATGAANGCCTTTACAATTGAATATATCCTGAGATC
CCTCGTTCATTTCTTGTTGCCCTATTTTTGGCCTTAGAAGTAAAAATTAACGCTTGCTAC
CTTCTGATAATTATAGAAGAACATTTATTATGTAGAATTAATGCTTACTAAAATGAGAGG
GTATGATGACGGAGGAGAATGCAGCGAGGGCATATGATTTAGCGGCTCTGAGGTATTGGG
GCCCTACCACTCACTTAAATTTCCCTGTGAGTCTGATCTTTCTGGGCCCGTACCTATAGG
GACCACTGTCGGCAGAGGCATCTTCAACGATGGCCTTGCCTTGATATCCTGCTGGTATTG
AGCACGAGCCACCTTCCTTGACCACTATCTTCACAATAAAGTGACAGATAGCTGGGCAAT
GGAATCCGAGGAGGTGTCCGGATATTACCCTCTGTGGAAGAGTCACAATTGCCCATTGGC
CTTGTGAGACTGTATCTCTGATAATATAGGAGGATACAAACGAGTCCAGCTGCACCATGA
GAACGGAAGATCTTCCTCGAGCCATCGAGCCATAAGAGACTCTTTGNAAAACAGTCCGCC
AGTCTTACGGGCAGTTCNGGGGTAGGGCCCTCTATTTGAATCTTTGACTACATGGGAATA
TGGGGATC
GenBank Accession BX890942 [GenBank]
Graphic View Graphic view of gene At1g72570
Predicted Position of Insertion Chr1:27332594 - go to primer design
BLAST e Value 7e-92
Hit Clone Code (BAC ID) F28P22
Hit Gene Code At1g72570 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Integrase-type DNA-binding superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37