SimpleSearch - Line and FST details


Line specific information

 
Line ID 288C06
Vector Used pAC161
Line Availability available as T3 set from NASC (N427582)
Segregation Analysis 50:45:35
Confirmed for Hit At5g62130
Parent of DUPLO pair 7974
Parent of pair(s) none

Gene hit At5g62130

 
Sequence (A. th genome BLAST matches underlined) 
>43-K015351-022-288-C06-8409
CTGATCCATGTGAGATTTCCCGGACATGTAAGCCTTTACATGGAGTAGCAATGATCCTTG
CAGAGTTATGCAATCAATGAATCTAACGGTCGACTCTGACAGTTAAATCAAAACATAGCT
CAGCATTTATAATGTCAGTAAGCAATAACAGAAAGCTAATTAAGAAATAAAGTTTGTATT
TTTACTTCTCCAAAGATATGAATAAAGCAGAGAAGAGCCGTGAATTGAAAGAAGCGATCT
TAGAAAAGGAGAAAGGAGAAGACTTTTTACTTGTAAAGAGAATCAGAATCTCCTTCACTA
TGGGATCCTCCCATTTAGGTGAG
GenBank Accession AL945282 [GenBank]
Graphic View Graphic view of gene At5g62130
Predicted Position of Insertion Chr5:24952609 - go to primer design
BLAST e Value 5e-133
Hit Clone Code (BAC ID) MTG10
Hit Gene Code At5g62130 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Per1-like family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL945281 [GenBank]


Last Updated on 10.06.2021 13:37