SimpleSearch - Line and FST details


Line specific information

 
Line ID 290A03
Vector Used pAC161
Line Availability available as T3 set from NASC (N427747)
Segregation Analysis 50:49:47
Confirmed for Hit At2g44180
Parent of DUPLO pair 2405
Parent of pair(s) none

Gene hit At1g05730

 
Sequence (A. th genome BLAST matches underlined) 
>17-K015353-022-290-A03-8409
TTTGATCCATGTAGAATTTCCCGGACATGAAGCACTTTACAATTGAATATATCCTGGACA
TGAGCAATCTTGGTATAGAGGAAACCATCTCCGGTTATAAATAAAAAAGTCTTAACCGAC
GTGAAAAGTGTTAAAACCCCAATTCACATTAGCCTGTTGCGATCTAAAACCTCTAAAACC
CTATGGGATCCTCCCTATAGTGAG
GenBank Accession AL945517 [GenBank]
Graphic View Graphic view of gene At1g05730
Predicted Position of Insertion Chr1:1718947 - go to primer design
BLAST e Value 5e-62
Hit Clone Code (BAC ID) F3F20
Hit Gene Code At1g05730 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation FAM136A-like protein (DUF842)
Insertion Classification TS2TE (5')
Confirmation Status unknown

Gene hit At2g44180

 
Sequence (A. th genome BLAST matches underlined) 
>17-K015348-022-290-A03-8409
TTGTCCATGTAGATTTCCCGGACTGAAGCCTTACATGAAGCACTATACTAAACTGAGAAA
TTAGCTTCCTTTGACATACACACTGGAGGACATGGCTCAAAAGTAACCCAAAGAAACTTA
CTTTCATCAAAATGTTCTTGAACGTAAGTCATCAGAGTATATATATAGTTTTAAGGAGTT
TACCTCAATTATGCCAGAATCACAAAGATTCTTTAAAGCCATCAAGTATTTTGGTTTCAC
CAAGGGCGGTCCANATAACGTCTGCAGAAAGCTATGG
GenBank Accession AL945516 [GenBank]
Graphic View Graphic view of gene At2g44180
Predicted Position of Insertion Chr2:18269505 - go to primer design
BLAST e Value 2e-91
Hit Clone Code (BAC ID) F6E13
Hit Gene Code At2g44180 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation methionine aminopeptidase 2A
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37