SimpleSearch - Line and FST details


Line specific information

 
Line ID 290B04
Vector Used pAC161
Line Availability available as T3 set from NASC (N427760)
Segregation Analysis 50:50:46
Confirmed for Hit At3g09540
Parent of DUPLO pair 12668
Parent of pair(s) none

Gene hit At3g09540

 
Sequence (A. th genome BLAST matches underlined) 
>26-K015348-022-290-B04-8409
TTTTTGATCCATGTAGCATTTCCCGGACATGAAGCTCTTGACACTTGAATCTATCGCTGT
TGCTTTGATGAATACATTACTCCTGCAACATACCTGATTCTGGAGGAAAGAATACTGTAT
TTAAGTGCATCACTGACAAAGTACACTAGATCCTTTGTACGTACTTGAGGTTATTAACTC
ATTCCCTTTCTATGCTATACATACCATTACGTGTTTTCTGTGTTTGGCGATCAGGCCCCT
GATCTACAGAAGCCCTTAGCTGGATTCTTAAGATCATAAGGGGCTATGAGGTTGATCGGA
GCCGCATCGAAGCTTAATCAGGGCGGAAAGCGCTATTAGGATTGTCCAATACAACACTAT
TCTGAATGGGCCGTTAAATCTCCAAGCGATGTACTCTAGATCTGTCTGACACACTCGACC
AGTTGTCGGAACCTTCCCTTCCC
GenBank Accession FR807272 [GenBank]
Graphic View Graphic view of gene At3g09540
Predicted Position of Insertion Chr3:2929491 - go to primer design
BLAST e Value 3e-29
Hit Clone Code (BAC ID) F11F8
Hit Gene Code At3g09540 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Pectin lyase-like superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR807272 [GenBank]


Last Updated on 10.06.2021 13:37