SimpleSearch - Line and FST details
Line specific information
| Line ID | 290D05 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N427785) |
| Segregation Analysis | 50:42:33 |
| Confirmed for Hit | At5g44670 |
| Parent of DUPLO pair | 2550 |
| Parent of pair(s) | none |
| Note |
Gene hit At5g44670
| Sequence (A. th genome BLAST matches underlined) | >36-K015348-022-290-D05-8409 NTGATCCATGGTAGATTTCCCGGACATGAANGCCTTTACAATTGAATATACATGTCGATT TATAAGGGCAATTGTTTTTAGGGTTTATCACGGTGTTTGACGGAAAAGTACAGTTTACGA CGACGGTTGTGTAAACTCTACCGTAACCCCAATCGGTTAAGATTTTGGTACCGTCGGTTA AAATCCGGTTATCGGATTGGTTTAGTGGAATCCATTCGCAACGGTAAGTGGGATGAGAGT AAACGTGAAGTGGTTTAGATGATAAACCGATAACGGCGAATGTGTTAACGCCGCCTCTGT AAGCGTTCATTAACACGAAGTTATAAGCTGCCCAGCCGTAACCAGTAAACGTCCGTTTAA TAACGCCGTTATTTAACACCTTCTCTTCAGTTAACGGCTGTTTCGTAACGCCGTTATCCA ACACCGGCTTCTCAGTTAACTTGACAGCGTTATCTAAGACTGGCTTTTCGACGACGGTGG TGAAGTTGACGGAGGTGGAGTTTACGGCGATGCGTGAGATGCAGAAACGGAGTTCGGAAG CGGAGATGGAGAAAGAAGAAGGTAGAAAAGGGAGGAGAGTAGCTAAAGTGCAGAGAACGA GTAACGCCATTAGAGCTATGGGATCCTC |
| GenBank Accession | AL945573 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:18020625 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | K15C23 |
| Hit Gene Code | At5g44670 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | glycosyltransferase family protein (DUF23) |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At2g42230
| Sequence (A. th genome BLAST matches underlined) | >36-K015353-022-290-D05-8409 CGCTATCGACATCGGAGAGCATCGCCGAACGCGGATACCTAGTGGATCCTCCCTATAGTG AGAATTTTGGCCTATGGGATCCTCCCTATAGTGAGACCTCGAATATGAAAAGGATCTCGA GTTTCTTAGAGAAAGGACGGGTCGTGCGACCGATAGTGCGGTAGCGCGACATCCCTTACG TGCATGGAGATGTCACATAAACCCGCTTGGTTTGACGACGTGATATGACCGTGATGGCTT AACCCCGACGCTTGTTGCTACTGACGAGCTGTAAGATGATGAAAGGAAATGTATCTAACT CTCAACAGCTACAAGGATGTATCTACCCATATGATAGAAACAGGAATGAGAACATTTATC GGTAAAATATGCGAAATATGAGACAATCCTTTTCATATGTTTCTGAATGATACCGTAATA TCATCTTAACTCGCATTGCACAACCATAGTACAATCCCGTGCCAAATGAACCTTTCTAAA CCACATAGATCACAAGATAACGCATTGAGCCCCATT |
| GenBank Accession | FR807273 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:17595555 - go to primer design |
| BLAST e Value | 7e-64 |
| Hit Clone Code (BAC ID) | T24P15 |
| Hit Gene Code | At2g42230 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | C-CAP/cofactor C-like domain-containing protein |
| Insertion Classification | CDSi |
| Confirmation Status | failed |
|
Last Updated on 10.06.2021 13:37 |
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