SimpleSearch - Line and FST details


Line specific information

 
Line ID 290D07
Vector Used pAC161
Line Availability available as T3 set from NASC (N427787)
Segregation Analysis 100:99:71
Confirmed for Hit At1g02840
Parent of DUPLO pair none
Parent of pair(s) 3510, 3589, 9762

Gene hit At1g02840

 
Sequence (A. th genome BLAST matches underlined) 
>52-K015348-022-290-D07-8409
CTGATCCATGTAGAATTTCCCGGACATGAAGCACTTTACAATTGAATATATCCTGGAAAT
CTAAAATGATATATATCTATGGGATCCTCCCTAGACGCGAGCTTACTGGATGGACGTCTG
AATTCGATACTACACCTAGCCATGGGGACATGAGGAGTGCTGTAGACATTGTGCATGTAC
CTCTTCAGCTTGCCAAAATTCGTATTACTGCTACTTTGTGACTGATTAGACTCTCACTCT
TGAATTTCCCCAGCTGAAAAAGCTCGACGACACAGAGTTTCTAAATGCGTTTTCGAATGG
ATATGTCCGGGTTAGTTGAAGCTGACTTTCCTGTGAATTGGGATCTTTTCATTGGTGAGT
CTAATATTTCTGTTTCATATCTCTTTAGGTTAGAATATATGATTCAAGGAAGGATTCTAT
GGGATCCTCC
GenBank Accession AL945575 [GenBank]
Graphic View Graphic view of gene At1g02840
Predicted Position of Insertion Chr1:627918 - go to primer design
BLAST e Value 3e-82
Hit Clone Code (BAC ID) F22D16
Hit Gene Code At1g02840 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RNA-binding (RRM/RBD/RNP motifs) family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR807275 [GenBank]


Last Updated on 10.06.2021 13:37