SimpleSearch - Line and FST details
Line specific information
Line ID | 290D11 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N427791) |
Segregation Analysis | 100:100:100 |
Confirmed for Hit | At4g18240 |
Parent of DUPLO pair | none |
Parent of pair(s) | 124 |
Gene hit At4g18240
Sequence (A. th genome BLAST matches underlined) | >84-K015348-022-290-D11-8409 NTGATCCATGTAGCATTTCCCGGACATGAANGCCTTTACAATTGAATATATCCTGCATAA GGGAAAGAAGAAAACAACACGCCCTTAGAAAGCAGCTTGGACTTTCTTCAGCGGAGTCAA GACGGCCTTTGGTAACTTAATGTTTCCGCGAATACTGCGAGAGTCTTGAGCATACAGATT CAGTTAATTTATTACACATTTATTTTGGTATAGGTTGGTTGCATAACAAGATTAGTACCA CAGAAAGGAGTTCATCTAATCAGACATGCCATATACAGAACATTAGAGTTAGGTGGACAA TTTGTACTTCTTGGTTCTATGGGATCCTCCCATAAAGGNGGAGANNNNANGANCCACCTT NCTTTNGCACTATCTTCACAATAAAGAGACAGATAGCTGGGCGATGGAATACGAGGAGGT TTCCGGATATTACCCTTTGTTGAGAAGTCTCAGTTGCCCTCTGGTACTTCTGAGACTGTA TCTCTGATATTTTTGGAGTAGACAAGCGTGTCGTGCTCCACCATGTAGACGAAGATTTTC TTCTTGTCATTGAGTCGTAAGAGACTCTGTATGAACTGTTCGCCAGTCTTATCGGGGAGT TCTGTTAGGTCCTCTATGTGAATCTTTGACTCCATGGGAATTGGGGATCCTCTA |
GenBank Accession | AL945580 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr4:10085882 - go to primer design |
BLAST e Value | 2e-141 |
Hit Clone Code (BAC ID) | T9A21 |
Hit Gene Code | At4g18240 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | starch synthase 4 |
Insertion Classification | CDSi |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |