SimpleSearch - Line and FST details


Line specific information

 
Line ID 292E02
Vector Used pAC161
Line Availability available as T3 set from NASC (N427986)
Segregation Analysis 50:37:32
Confirmed for Hit At2g45110
Parent of DUPLO pair none
Parent of pair(s) 6883, 84420, 84429

Gene hit At2g45110

 
Sequence (A. th genome BLAST matches underlined) 
>13-K015437-022-292-E02-8409
CTGATCCATGGTAGATTTCCCGGACATGAAGCACTTTACCACATTTAAGCATCATATAAA
TGAATTTACTATTCTAAGAATTTATGTATATATATTGTTAGAAATATGTAATATTATTAC
GTACCGGTGCTACCGGCGCCGAATGGTTCACCGTACCAAGTAACTCCGGCGGTTCCCGAT
CCAGCTACATCTATAGTCTCATTTTGGCAATAACAAAATTTTAGTGAGACTGCGAAAAGA
GCTATGGGATCCTCCCTTTAAGTGAGAGNCNNNCCCCGGNCNCCGGCGGGCCGCCCCCGA
CCCGGCGGGGGGCGGGGGCCGCGAGGGCGCCCCCCGACCCACGAAGAAAAGCTCCGAGAA
CGCGCTATAAGCTCACCGCACACACCCCTACCCACCACCATCCCACACCACCACAGCCCC
CCGTACTGAACAAAATTTAAACCGCACACATACCTAAACCGTACAACACATATACCCCAC
ACCGCGTCCCCATTAAACCCACAGAGATACACAAACAACAACGAACATACACACCAATCC
ACAATACAGTTCCCCATACAGTAACCCCCTGACCAGCATGCGCAATACATCCCAGACAAA
ATAATCAGTAGTATTCACCCCAGACGCGCCCCCACACACCCCGAGAAACACCAACACCAA
AAAAAAAACATACAAGGAGATCACCGAACCGCGACACTACACACCACTATCCCCAGACCA
CTCCGCCAAATAAAACCCCGCACACGAACAACAAGGAGTCGCCCCACGCATTTCAACAAA
ACGACCCCCCGAGACCACAAAGAAAGAAAAGGAAACACAGCACC
GenBank Accession AL945878 [GenBank]
Graphic View Graphic view of gene At2g45110
Predicted Position of Insertion Chr2:18599810 - go to primer design
BLAST e Value 4e-112
Hit Clone Code (BAC ID) T14P1
Hit Gene Code At2g45110 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation expansin B4
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL945879 [GenBank]


Last Updated on 10.06.2021 13:37