SimpleSearch - Line and FST details


Line specific information

 
Line ID 292F01
Vector Used pAC161
Line Availability available as T3 set from NASC (N427997)
Segregation Analysis 50:49:48
Confirmed for Hit At5g14720
Parent of DUPLO pair 2521
Parent of pair(s) none

Gene hit At1g16110

 
Sequence (A. th genome BLAST matches underlined) 
>06-K015442-022-292-F01-8409
TTTCCCTGGACATGAAGCCTTGACAATTGAATATATACTGCACGTGTGTGTCGATTCATA
TTGAAATTATGAGGTCCACTTTTTGGACTATGGGAGGGCCAGCCTACAATGTAGAGAACA
CACGAGAGACTATGCACATCATAGATCTGTGCTGCATCGCCTGCATGAACTTTAAGGCTG
ATACCATACGGCATATGTCCACTATGTTCGAGGATATTACTCTGGATTCCTCTCCTACAC
CTGTGGCCATCTTCTTGAGCATAAAAACCGAAAATTCAGCTATCTTCATGGCTGATGGAT
CAGATTTTCAGTTATTGCTTTCTTGCGTTCCTCCAAGTAGATTTGGTTGCTGTCTGTTCG
TATAGGACATTTTCAACAATCAGATTTAGGCCATACATTCCCAACGTCCACTATGGGATC
CTCC
GenBank Accession AL945893 [GenBank]
Graphic View Graphic view of gene At1g16110
Predicted Position of Insertion Chr1:5520875 - go to primer design
BLAST e Value 3e-103
Hit Clone Code (BAC ID) T24D18
Hit Gene Code At1g16110 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation wall associated kinase-like 6
Insertion Classification TS2TE (3')
Confirmation Status unknown

Gene hit At5g14720

 
Sequence (A. th genome BLAST matches underlined) 
>06-K015437-022-292-F01-8409
TTTATGATCACTGTAGAATTTCCCGGACATGAAGCACTTTACAATTGAACATATACTGCT
ACTGATTATTCGTATCTGTGTTACGGGTTATACAAGCCTATACTACCCTATTCTACGGAC
AACTTCTATGGGGACCTCCCTATAGTGAGAAACTAAACTTCTATCTTTGATGTAACTCCA
GGAAATAGCTATGGGATCCTCCCTCTCGTGAGATCCCCA
GenBank Accession AL945892 [GenBank]
Graphic View Graphic view of gene At5g14720
Predicted Position of Insertion Chr5:4752289 - go to primer design
BLAST e Value 7e-15
Hit Clone Code (BAC ID) T9L3
Hit Gene Code At5g14720 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Protein kinase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37