SimpleSearch - Line and FST details


Line specific information

 
Line ID 293A04
Vector Used pAC161
Line Availability available as T3 set from NASC (N428036)
Segregation Analysis 50:48:37
Confirmed for Hit At5g44280
Parent of DUPLO pair 12731
Parent of pair(s) none

Gene hit At5g44280

 
Sequence (A. th genome BLAST matches underlined) 
>25-K015438-022-293-A04-8409
TTGATCCATGTAGAATTTCCCGGACATGAANGCCTTTACAATTGAATATATCGCAGACAC
AAAAAAAACAAGAGGGATCCCCGGCTCCCTTATTACACATGGTAGGATCCTTATTATACG
GAGATAAAGCTGACATTCTAAAGGTCAAGTTAAATAGAAGATGAATCAGTTCTTAGGACA
CAACTTCCAGTAATGGCCGCTATTATTCAAGGTAAAGACTTTACATTGTTTAGCCACAAG
AGCGTAGAGGTTTTGAGCAGTAATACGAGAGGAATTACAACATGCAAGTGCTAAGAAGAT
GCATCAACAGATTACTAAATCAAGCAGAGCAATTTTAACATTTAATTGGCTATGGGATCC
TCCCTAGTAGTGAGGCNTACACTTAGTGATCCATGCCGCAACTGTTACGACATTCGGCAG
CATGAACTCATTTGGCAGGCTCTGAGGACTGAAACAGACATCTGCAGGGGGCACAGACAT
TTCTTCAGTTATCTAAAGCT
GenBank Accession AL945947 [GenBank]
Graphic View Graphic view of gene At5g44280
Predicted Position of Insertion Chr5:17838261 - go to primer design
BLAST e Value 2e-119
Hit Clone Code (BAC ID) K9L2
Hit Gene Code At5g44280 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RING 1A
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL945947 [GenBank]


Last Updated on 10.06.2021 13:37