SimpleSearch - Line and FST details
Line specific information
| Line ID | 293B08 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N428052) |
| Segregation Analysis | 50:50:37 |
| Confirmed for Hit | At2g28800 |
| Parent of DUPLO pair | 12624 |
| Parent of pair(s) | 2931, 9627, 96777 |
Gene hit At2g28800
| Sequence (A. th genome BLAST matches underlined) | >58-K015443-022-293-B08-8409 GGCTTTTGATCCATGTAGCTTTCCTCGACATGAANGCCTTTACAATTGAATATATCCTGC ACCAGCAATGTTCAATAAAACTCGGATCCTACCATAAACACAGTCATATACAATAATATT GATGTTACAAAATGTAGTCACACTATGGGATCCT |
| GenBank Accession | AL945973 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:12357197 - go to primer design |
| BLAST e Value | 3e-26 |
| Hit Clone Code (BAC ID) | F8N16 |
| Hit Gene Code | At2g28800 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | 63 kDa inner membrane family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At4g39200
| Sequence (A. th genome BLAST matches underlined) | >58-K015438-022-293-B08-8409 CTGATCCATGTAGAATTTCCCGGACATGAAGCACTTTACAATTGATATTTATCCTGTACC ACTATTGAGACTTAAATATAGGAAGGTATCATGATCATGTGCTTGTGAACTGTGTTGAAC TTTTAGTAGTATCTATCCGATACTAGCATGCACCATGTTGTTCACCTTCTCCTTTTGCTT TCCCTTGCTCCACTTCTGTTTTTTTGTTTACCATAAAACAAAGAGAGCAACCATTTAATT ACAAAGACAATGCAAACTCCAACACTAATCTAGCATCAATCGCAAAACAAATCCATTTAC AAGCTTCACTTAAACAACACAATTTCAGAAACTACAAACCAGATCTCTCTACACATTCCA ATTAAACCTAAATTATATTCGGAAACGAACCTTCTTCTTCTGCTTTCCACCTCCGGATTT CGCCGGCTTCGATGACGGTGGCGGAACCTTATCCTTCTTCGGCGCCTGTAACCATGACAA CGAAAGTAACGATTCAGACAAGAGAAAGAAGAAAATGAATACAGGTGATTAGTTAGAGAA AAGGATGATAGAAAACGATACCATGTTGATTTCGACGGCGAGGGAAAAGCGAACGGCGAA TAGTAGTGGGTGAAAGATGAGGCTGAGGGAGATAGCGCTGCTA |
| GenBank Accession | AL945972 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:18257969 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | T22F8 |
| Hit Gene Code | At4g39200 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Ribosomal protein S25 family protein |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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