SimpleSearch - Line and FST details
Line specific information
| Line ID | 294B04 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N428144) |
| Segregation Analysis | 50:49:36 |
| Confirmed for Hit | At3g15355 |
| Parent of DUPLO pair | 12174 |
| Parent of pair(s) | none |
Gene hit At3g15355
| Sequence (A. th genome BLAST matches underlined) | >26-K015444-022-294-B04-8409 GTGTAGCTCCGTTTCTGCAAGCATTACACGCCCTTCACACGTCGTGAGCACAGCTGAAGA AATGTCCACTACGCAAAGTCTTCAAAATACTGTAGCATTCGAAAAACCACCAGAAACAAT CAATCTCAAGTTTTAGTGAAAAGGTTTACGCTTTTTTATTAGTAGAGAGAGACAAGTGTA ATGGGATGAGGTTTTTGCTTTTACCTTGGGTGGTCTCCTCATGGTGTAAACCATAGTCTT TAAAGACAGTATGAATGTGTTTTCGCTGTAAGCTTTAGAGGTACTCTCACCATGTGCAGA ACCTGCTGACCTCTCGTAGCCGGGCTCGTTGAAGTAAGGTTTTTGATTTAAGATTANACC TTGGATCGAGACAAGAACTTGTATCATCGTCGAAGTGTTGGGGATCCATTTCTGCCTCTG GTTACCACTCCAAGTGCCGAGAAGACTCATACACACTTTCCCACAATTGTACAGATTTGG GTTGATTCTTAGCCCACCAAAATGGTAATGAACAATCTTGTACAATCATGAGGAAATTCA CATATCAAATGAGACAACCTTTACATAACAATAAAAAATACTCAGCTTGNAGAGAGTTCA GTTGACTTACCGTTGTCTGTAAAAAGTTATCTTTCCGACATTTATATATCTTTCCTCACG ACACCTTCATGGGNGGGTATCTCCTTGGGCATCGATAATTACATCCCTTAAAA |
| GenBank Accession | AL946103 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:5186427 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | MJK13 |
| Hit Gene Code | At3g15355 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | ubiquitin-conjugating enzyme 25 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit T14A4
| Sequence (A. th genome BLAST matches underlined) | >26-K015439-022-294-B04-8409 TTGATCCATGTAGATTNTCCCGGACATGAATGCCTTTACAATTGAATATATCCTGCTAGT TAGGTGCGAGCTTGATAGGGTAATGGCAAACAATGACTAGATTTTGGCATATCCTTTAGG TCGCAGCGAGTATCTCCGGGTTGAGGGTTCTGATCACCGTCCTCTTGTCATCTCCTTTGA CCCGAAAAAGAAGAGAAAAAAGGTTATCTTCAGATATGAACGACGCTTAAAGGATATCAG TGAAATCAAAGACATTGTGTTGGAGACTTGGACCTCAACTCGATCTGCGTCTGTGGACCA AAGATTACTGTCCTGCAGGCTATGGGATCCTCCCATTTAGGTGAGGACTCNNNGAAGTAA GGTTTTTGATTTAAGATTACACCTTGGATCGAGACAGGAACTTGTAGCATCGTCGAAGTG TTGGGGATCCATTTCTCCCTCTGGTTACCACTCCAAGTGCCGAGAAGACTCAGACACACT TTCCCACAATTGTACAGATTTGGGTTGATTCTTAGCCCACCAGAATGGTAATGAACAATC TTGTAAAACCAAGAGGAAATTCACATATCAAATGAGACAACCTTTAGAAAACAATAAAAA AAACTCAACTTGGAGAAAGTTCCAGTTGACTTACCCGGTGGCCGTAAAACGGTCTGTATC CGGGGAAGAAGATATTAAAAAAGAACAGACCCTCATGGCAGGGGAGGTCCTTGGGC |
| GenBank Accession | AL946102 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:2725160 - go to primer design |
| BLAST e Value | 5e-142 |
| Hit Clone Code (BAC ID) | T14A4 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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