SimpleSearch - Line and FST details


Line specific information

 
Line ID 295A05
Vector Used pAC161
Line Availability available as T3 set from NASC (N428229)
Segregation Analysis 50:48:30
Confirmed for Hit At5g50170
Parent of DUPLO pair 30
Parent of pair(s) none

Gene hit At5g50170

 
Sequence (A. th genome BLAST matches underlined) 
>33-K015440-022-295-A05-8409
CTGATCCATGGTAGATTTCCCGGACATGAANGCCTTTACAATTGAATTTAAGTCTCTGTA
TATGGAGGTGTTGTTTTCTGGTGTTGGTGTTTAAGCATGAGAAGAAATGGCATGTTTGTG
TCTTCTTTGGTGATTCATGCTTTGAGCATTGGTTAAGTAACTTGTAGATTCATTTGAAAT
GGTGTTTTCTGGTGTTAGGTGAGAATTTTAAGTCTCTATGGGATCCTCCCTTNAGTGAG
GenBank Accession AL946228 [GenBank]
Graphic View Graphic view of gene At5g50170
Predicted Position of Insertion Chr5:20421758 - go to primer design
BLAST e Value 5e-68
Hit Clone Code (BAC ID) K6A12
Hit Gene Code At5g50170 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation C2 calcium/lipid-binding and GRAM domain containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL946229 [GenBank]


Last Updated on 10.06.2021 13:37