SimpleSearch - Line and FST details


Line specific information

 
Line ID 296F04
Vector Used pAC161
Line Availability available as T3 set from NASC (N428384)
Segregation Analysis 50:37:24
Confirmed for Hit At5g07250
Parent of DUPLO pair none
Parent of pair(s) 60852, 93459, 93460, 93461

Gene hit At5g07250

 
Sequence (A. th genome BLAST matches underlined) 
>30-K015552-022-296-F04-8409
NTTTTGATCCATGTAGCATTTCCTCGGACATGAAGCCTTTACAATTGAATATATCCTGAC
AAAAAAAACATAAACAAATTACAGACAGAGAAGAGAGAGATCACTATGGCTGTCGGAGAT
GATGATCTGGAGAACAGAATGTCGGCGAAAGATCGAGGAATCGGAAGCAGAGGCGGTGAT
CGGAATCGAATCGGACCACCGCCTCTGCCGGTAGCCTTGTCGTCGTCTACTGAATTTGGC
GATAACGCGTTGTCGTCGCGGTGGACGTCGTGGCTTGTTCCGATGTTCGTTGTGGCTAAC
GTTGCGGTTTTCGTCGTGGCGATGTTCGTTAATAACTGTCCGAATCATTTCGAGTCTCAC
CGTCTCAGAGGTCACTGTGTCGCCAAGTTTCTCGGTAGACTCTCCTTTGAGCCTCTCCGA
ACTAATCCTCTCTTTGGTCCATCTTCTCACACGTACGTTTTCTAAATTTTGTATCGATGT
TGATTTAGGGTTCTAAATACTATGGGATCCTCCTAAGGGGGGAAGGANNNNGNNCATTAA
TGACTCCAGATTTTTTTATTGCCATACAAAGATGCTTTCCTTCCGAGTCCGTAACGCCTA
CATCCCCGAACACAGGTGCACCACCATGAGCTGTACCAATGTTGTTGATCAATCCGCTAA
TTAGGACTGTTGCATCCCCGCCGGGACCATCCGATAATTGCAATTTTCTACCCGAAAAGG
ATTAGGGGCCCGAAGAACTACTTGTCTAATTCCTGTTTGAGAATACAAAAATTTGGTTC
GenBank Accession AL946447 [GenBank]
Graphic View Graphic view of gene At5g07250
Predicted Position of Insertion Chr5:2275982 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T28J14
Hit Gene Code At5g07250 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RHOMBOID-like protein 3
Insertion Classification TS2TE (5')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL946447 [GenBank]


Last Updated on 10.06.2021 13:37