SimpleSearch - Line and FST details


Line specific information

 
Line ID 296H02
Vector Used pAC161
Line Availability available as T3 set from NASC (N428406)
Segregation Analysis 50:40:37
Confirmed for Hit At4g02330
Parent of DUPLO pair none
Parent of pair(s) 3200, 3308

Gene hit At4g02330

 
Sequence (A. th genome BLAST matches underlined) 
>16-K015495-022-296-H02-8409
AATTTGATCCATGTAGACTTTCCCTTGACATGAAGCCTTTACAATTGAAGCCATGTAGGT
AATGGGCTTTGGAAAACACAACGTTTTGGATGATGTAGTGATATTGACCGTCTCGAACGA
TGTTATGAGATAGTCTGTTGTGAGGCTTGCTATGGGATCCTCCCTATAGTGAG
GenBank Accession AL946474 [GenBank]
Graphic View Graphic view of gene At4g02330
Predicted Position of Insertion Chr4:1032880 - go to primer design
BLAST e Value 4e-38
Hit Clone Code (BAC ID) T14P8
Hit Gene Code At4g02330 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Plant invertase/pectin methylesterase inhibitor superfamily
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g73250

 
Sequence (A. th genome BLAST matches underlined) 
>16-K015552-022-296-H02-8409
TTTTGATCCATGTAGATTNTCCCGGACATGAANGCCTTTACAATTGAATATATCCTGCCG
AGCTTAAAAACACGCCGAGCTTGATCTCACTCGTCAAGCCGATGTTGAATCCTTCTTTTC
TAAGAGAAGCCAGTTTATGTAATCCTATGGGATCCTCCCATNAGTGAG
GenBank Accession AL946475 [GenBank]
Graphic View Graphic view of gene At1g73250
Predicted Position of Insertion Chr1:27546041 - go to primer design
BLAST e Value 4e-32
Hit Clone Code (BAC ID) T18K17
Hit Gene Code At1g73250 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37