SimpleSearch - Line and FST details


Line specific information

 
Line ID 299E01
Vector Used pAC161
Line Availability available as T3 set from NASC (N428657)
Segregation Analysis 50:17:11
Confirmed for Hit At3g61300
Parent of DUPLO pair none
Parent of pair(s) 5224, 5340, 5357, 94447, 94458

Gene hit At3g61300

 
Sequence (A. th genome BLAST matches underlined) 
>05-K015515-022-299-E01-8409
TTGATCCATGTAGATTTCCCGGACTGAAGCCTTTACATGTAATTGGGTCTCGTCTTTGAT
CCATATACTTAAGAACGTTTGATTGTTGATTGGATTTGGAGAAAGCGAATACTTCGCTCC
AAACCGGGTTTTGATTCTTCTCAAAATGTTTGCTTTTGCCGGTATACTTTCCGAGTCTGA
CTTCCATGTATGGATCTATGGGATCCTTCCTATAGTGAGTCGTTCGGACCTCAAGCCGAC
CACGCGTTCTCAGACACGACCTACTCATACATCTCTCAACCCTCATAACAAATGGAGCTT
GTTCCTCTACCGTCTATCATTCTCCACAGCTTCGGTACCTCCGGGTTAGTGTCCTCGAGG
CCCACCACTCATCTATTGCTCCACACCCGACTCGATTGGTACATTTACCTGTCGAACACC
GCCTGAATACACACGTCGTAGTAACCAAACCTGCTCCCGCTCCTCCATCTCAGACCGGAC
GCCGAGTTCACTCTCCTCCCCCCCTGAACCGTTTGAAGACCTGATGATCATGGCCCCCCC
CCCCACCCTTTACCTACCCCCCCAGGACCCTCCTCCCATCGCTCCACATTCCCATTTCCC
CCCATTTGATACCCCCCTTCGTTGGCCCCCGCCCCGTGCCTAACCCCNGGCGTTAATCCT
AAAACCCGGCACCGATG
GenBank Accession AL946840 [GenBank]
Graphic View Graphic view of gene At3g61300
Predicted Position of Insertion Chr3:22688609 - go to primer design
BLAST e Value 7e-52
Hit Clone Code (BAC ID) T20K12
Hit Gene Code At3g61300 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL946840 [GenBank]


Last Updated on 10.06.2021 13:37