SimpleSearch - Line and FST details


Line specific information

 
Line ID 299G11
Vector Used pAC161
Line Availability available as T3 set from NASC (N428691)
Segregation Analysis 50:26:20
Confirmed for Hit At1g67390
Parent of DUPLO pair 11883
Parent of pair(s) none

Gene hit At1g67390

 
Sequence (A. th genome BLAST matches underlined) 
>87-K015515-022-299-G11-8409
NTGATCCATGTAGAATTTCCCGGACATGAANGCCTTTACAATTGAATATATCCTGAGCAG
TGGTATCCGGATAGAAAAAAACTGATCAAATCTTCTAAGTACTAAAATTAAAGCACTAAA
ATGAAAGTACCTTAAATAGTATATGGAGCTCTTCCAATACTCCAGTTCCAAGCAGACTAG
AAATGTCCCTTAGCATGTGGACTTCTGTCCGATATTTGTTACATCCACGACCACCTTCAA
AGACTTAGGCTTTTGCAAGTAGCTAGTGGGATCCTCCTATAAGGAGAGANNGNNNCCNNG
ANNNTTTATAAATNGGGGGAAGAATACTTTTGAGGATAAAAGTAAACGGTTTCTA
GenBank Accession AL946895 [GenBank]
Graphic View Graphic view of gene At1g67390
Predicted Position of Insertion Chr1:25246713 - go to primer design
BLAST e Value 8e-67
Hit Clone Code (BAC ID) F1N21
Hit Gene Code At1g67390 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation F-box family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g67400

 
Sequence (A. th genome BLAST matches underlined) 
>87-K015556-022-299-G11-8409
NTTTGATCCATGTAGATTNTCCCGTGACATGAAGCCTTTACAATTGAATATATCCTGACA
GTGTAGTATCGTACTTTTGAACAACTCCTACACATAATTCCATCAATACATCACGATCCC
TTGCACCATATACTCAAGACAATATATAACCGAGAAGATGATGGACTCACGTTGAACCCC
ATGTATGAGGCGCCCTTGTGCCATGCCATTGCTTGTCCATTACCACAAAGGCCACGCAGA
AAAGCAGATCCAAGGCCCATTCCCTTTCTATGGGATCCTGCCATTTNAGAGAGATTAGGC
CCCCATGATATTCTATAAATCGGGGGAAAAATACTTTTGAGGATCAAAGGAAACGGTCCC
TATGGGATCCC
GenBank Accession AL946896 [GenBank]
Graphic View Graphic view of gene At1g67400
Predicted Position of Insertion Chr1:25248161 - go to primer design
BLAST e Value 8e-21
Hit Clone Code (BAC ID) F1N21
Hit Gene Code At1g67400 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ELMO/CED-12 family protein
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37