SimpleSearch - Line and FST details


Line specific information

 
Line ID 300D09
Vector Used pAC161
Line Availability available as T3 set from NASC (N428749)
Segregation Analysis 50:18:12
Confirmed for Hit At3g60510
Parent of DUPLO pair 2551
Parent of pair(s) none

Gene hit At3g60510

 
Sequence (A. th genome BLAST matches underlined) 
>68-K015599-022-300-D09-8409
TGATCCATGTAGATTTCCCGGACATTTTTCCCGGACATTTTTGAGCTGTTCTTCCATACA
GGAACCTCCTGTTGTAGGACAAGAAATTATACTATTTAGCAGGTAAGATAAGTTTTATGG
AAACAGAAAGATCTCAAATTATATAATCTAAATTACCTCACTTCTAATATAATGTGTAGC
AAGGCCACATGCCAACATTTCTGCCCCACTGAGCTTTAACCCAGTCAGACCCAGATACTC
CCCTGCATAGACTCTATTAAATCGTCCATCTGAGGGAGCTAATGTATACTATGAAACAGC
AGAATTTGATATTTAACTTTGCTGCTGGATCAGCGATTTCTATGGTAATTGTCCAAATAA
AAATTGCTTTACAGCAGTTAATAACACAGTCAAATGAGATTATGAGAAACCTATGGGATC
CTCCATTGNNNGGGAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNGNGNNNNNNNNNNNNNNNGNNNNNNNNNNNNNNNNNNNNNNGNNNNNNNNG
NNNNGGNNNNGNNNNNNGNNNNNGGGGGGGGGGGGGNGNGGGGGGGNNGGGGGGGGGGGG
GGGGGGNGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGNGGGGGGGGGGGNGGG
GGNGGGGGGGGGGGGNGGGGGGGNGGGGGGGGGGGNGGGGGNGGNGGGGGGGGGGGGGGG
GGGGGGGAGGGNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAAAAGAAGAAAGAAGAGAACGGCGAGG
A
GenBank Accession AL946975 [GenBank]
Graphic View Graphic view of gene At3g60510
Predicted Position of Insertion Chr3:22358084 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T8B10
Hit Gene Code At3g60510 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ATP-dependent caseinolytic (Clp) protease/crotonase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37