SimpleSearch - Line and FST details


Line specific information

 
Line ID 302B09
Vector Used pAC161
Line Availability available as T3 set from NASC (N428917)
Segregation Analysis 50:39:25
Confirmed for Hit At1g30010
Parent of DUPLO pair 11873
Parent of pair(s) none

Gene hit At1g30010

 
Sequence (A. th genome BLAST matches underlined) 
>66-K015562-022-302-B09-8409
AATTTGATCCATGTAGACTNTCCCTGACATGAANGCCTTTACACTTGTACGCTGCCTGGT
ATGAACTTAAATCTCGCGCCTTAGTGTACGTGCGTTGCCTCACGGCATCTTACCCTTGCA
TTAAGCGACAGTATCATTAATTATGCACCTGAATACTGTGATCTTCTGAGAATGGGACTC
GTTGGTGCTATATAAGGAGTTCAATTCTCTCGCATGTCTTTGATTCCGTCTTAGTGATTA
TACTCCATTCCCAAGGAACTGGATCCCAAATCATGAGCAAGTTTTGCAGGAGTACATCAG
GCTACAAGACCCTAAATTCTTCTGTGGGTTGCATAGGTCAATAAAACGCGAGGGTCTAAC
CTTGCCCCAGGATGAGATCTCAGAGGCTGTGTGGGATTTCAAGACTCTTGGTGCTTGGAG
ATCAAAGTATGAAAATAAAAGAGAAGCAGATGATGGGTTGCAGAAATTAGACTCACAAAC
ATGATTGTCTACCCATTACCTCTTTATTTGGTGTATCTGGGCCAAGGATCATGATAAACC
AGAGACTGAGAGCTATAGCGGGAGAATTTCATCGGTATTCCTTTTTAAATGCCTTTCTTT
CCAAGAGACCCTGATTCTGGATTTGGCTTTCCTTACCCAACCAAATCATTGAACCTGGGT
AATCTAACCCTATAC
GenBank Accession AL947169 [GenBank]
Graphic View Graphic view of gene At1g30010
Predicted Position of Insertion Chr1:10514892 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T1P2
Hit Gene Code At1g30010 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Intron maturase, type II family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL947168 [GenBank]


Last Updated on 10.06.2021 13:37