SimpleSearch - Line and FST details
Line specific information
| Line ID | 303F06 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N429058) |
| Segregation Analysis | 50:10:3 |
| Confirmed for Hit | At4g37260 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At4g37260
| Sequence (A. th genome BLAST matches underlined) | >46-K015560-022-303-F06-8409 CTGATCCATGTAGATTNTCCCGGACAGTGAAGCACTTTACAATTGAAAAGCTTTTGGGTT GAAGAGGATACTAGCGAGTAAGAGAGATGTTTTATACGAGAGGGGAGTGGGCAAAAGGGT CACCGGTTCAACCGGTAATATTTTTCTTGTCGATTTAGCGGAAACTGACTATTAAACTAG GGGATCCTCCCGTTAGTGAGAGGGGCAATATCGCAGCTTTTGGGATCTCAGCTATAGTTA GTGGATTAAGCGTAAACGCACTCAATGTACC |
| GenBank Accession | AL947350 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:17540505 - go to primer design |
| BLAST e Value | 7e-24 |
| Hit Clone Code (BAC ID) | AP22 |
| Hit Gene Code | At4g37260 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | myb domain protein 73 |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At3g58790
| Sequence (A. th genome BLAST matches underlined) | >46-K015563-022-303-F06-8409 CTGATCCATGTAGAATTTCCCGGACATGAAGCACTTTACAATTGAATATATCCTGCAAAT ATTTTACTCCTGTAGACAGTCACACCGACACATTAGCAGGGGGAGGGTTCCAGTGTGGGA GCCCACATGGAGAATTAATGGTGCGTTATTCCTGGAGATCACCGTCCATTAATTGCTCTC TTATGGCTATGGAGTTGGTAGTTAACCAAGTTTTTGGGATTTTAACTATAATTAATCAAT TAATCTTAGTAGCAATCAATGTACCACTTCCACAAACTTATTGGTCTCAAGTCTTTCTCT GTAACTTATAGCGTGTCCTCGTCGTCATTATAATAGTTTGTAGTTGTACTCTACTTTTTT GGAAGATATTATTCTTCAGCTATGGGATCCTCCCTTAGGTGAGANNNNNNNNNNNNNNNN NNNCCCNNNNNNNNNNNANNNNNNNNCNNCNNNNNGCCCCCCCCCCNNNNNACCCGCCCN CCCGGGCGGCGGGCGCCGCGGCGCCGCCGCCCGNGCCCCGGCCGCCCCCGCCCCGCCCGC GANGAAACACCGCACCGACGACACGAAAAGACAGAACAACACCCAAACACA |
| GenBank Accession | AL947351 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:21746587 - go to primer design |
| BLAST e Value | 8e-172 |
| Hit Clone Code (BAC ID) | T20N10 |
| Hit Gene Code | At3g58790 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | galacturonosyltransferase 15 |
| Insertion Classification | Promoter |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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