SimpleSearch - Line and FST details


Line specific information

 
Line ID 304B04
Vector Used pAC161
Line Availability available as T3 set from NASC (N429104)
Segregation Analysis 50:49:44
Confirmed for Hit At1g60140
Parent of DUPLO pair none
Parent of pair(s) 4740, 4749, 4766, 4858, 10092, 10096

Gene hit T13D8

 
Sequence (A. th genome BLAST matches underlined) 
>26-K015570-022-304-B04-8409
NTTTTGATCCATGGTAGATTTCCCGGACCATGAAGCCTTTACATGTAAATTTTCTGTTCT
TTTTATTTATTTACTTTACTGGTGTATAAGAATAGAGCTCAACTACTACGTTACGCACAT
CCAGGATTATGTAGGGTTTTAATTCTAATAAAAACCAAATTAGGCTATTAGAATACTTTA
AGATTTCTATGGGATCCTCCCTGTAGTGAG
GenBank Accession AL947412 [GenBank]
Graphic View Graphic view of sequence AL947412 of line 304B04
Predicted Position of Insertion Chr1:22181826 - go to primer design
BLAST e Value 4e-75
Hit Clone Code (BAC ID) T13D8
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At1g60140

 
Sequence (A. th genome BLAST matches underlined) 
>26-K015592-022-304-B04-8409
NTGATCCATGTAGATTGTCCCGGACCTGAANGCCTTGATAATTGACTATGTTGCCCATAA
TCTTTTTGAGGAATTCTGTTGTGTAACGACTTTCCTCCCCAATATGTGCATAAAATATTC
TACCTTGGCTTTTGTAAACAGCAACTATGGCCACTTTTCCATTACATGTTACCCATGTAT
CCTGATCGTGGTGAACGGTTTGATCGTGGTCTTTGGCAGGCATATGTTTCTGCCAACAAG
ATATTTGCAGATAAGGTAATGGGTGTGATTAATCTTGAAGAAGATTATATCTGGATTCAT
GACTATCATTTAATGGTTCTCCCAACATTTTTGAGAAGGCGGTTTCACAGGGTTAAGCTT
GGTTTCTTCCTCCACAGTCCATTCCCTTCTTCAGAAATTTATCGAACCTTACCTGTTCGA
GAGGAACTACTAAGAGGGCTCTTAAATTGTGACTTAATTGGTTTTCACACGTTTGATTAT
GCACGGCATTTCTTGTCATGCTGCTGTAGAATGCTTGGATTGGAGTATGAATCTAAGAGA
GGGCATATTGCTCTTGACTACTTGGGACGTACAGTTTTTCTGAAGATTCTTCCTATAGGT
ATTCACATGGGAAGGCTGGAATCCGTTCTGAATCTTCCTGCTACAGCTGAAAAGCTGAAA
GAGATTCAAGAAAAGTATCGGGGTAAAAAGAATATTCTCGGGTGTTGATGACATGGATAT
ATTCAAAGGTTTAAGTTCTTAAATTTTTGGCCTTTTGACACCTCCTTCAGCAATATCCTA
GenBank Accession AL947413 [GenBank]
Graphic View Graphic view of gene At1g60140
Predicted Position of Insertion Chr1:22179706 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T13D8
Hit Gene Code At1g60140 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation trehalose phosphate synthase
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37