SimpleSearch - Line and FST details


Line specific information

 
Line ID 304B11
Vector Used pAC161
Line Availability available as T3 set from NASC (N429111)
Segregation Analysis 50:47:32
Confirmed for Hit At1g74060
Parent of DUPLO pair none
Parent of pair(s) 68923, 97307

Gene hit At5g06590

 
Sequence (A. th genome BLAST matches underlined) 
>82-K015592-022-304-B11-8409
TGGGATCCTCCCTATAGTGAGAAGACACGATATGAGGACCAGATCTTATAGAACCGGAAC
GCAATGTGAAGAACCAATACGGCAAACATTTCCATACGGAGTGGTGTATGATGGCTTACA
CTCAGATATATGCACCTTTATTATATATAACTCCGTACGGTGAGTCAACCACAAGTCTCT
TCATCCGTGTCAGGAGCAACGTATACGCTTTCTCCTTGTGGCCTGCAATACAAACCATCA
TCATATATTTTTTCTGTGAATCTGAAGATGATCAACCTAATGATGCTACTACAGGCAGAT
GTGACGAGGAAGATATGAACCTACCAAGTCCTATGGGATCCTCCCTATAGTGAG
GenBank Accession AL947420 [GenBank]
Graphic View Graphic view of gene At5g06590
Predicted Position of Insertion Chr5:2018892 - go to primer design
BLAST e Value 1e-93
Hit Clone Code (BAC ID) F15M7
Hit Gene Code At5g06590 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hypothetical protein
Insertion Classification TS2TE (3')
Confirmation Status unknown

Gene hit At1g74060

 
Sequence (A. th genome BLAST matches underlined) 
>82-K015570-022-304-B11-8409
CTATGGGATCCTCCCTATACTGAGACAATGACCATGTAAATGCATGCATGTCGACTCTAT
GGGATCCTACCTATATCGAGATGTTTTCTGAAAAAAACATAAAAAAAGTGAGGGGCACCT
TTATTAATCACGGCACAAGACCTCCGTCTATATGGGATCCTTCCTATTCTGAGACCTCGC
CAAGACCCTTAAAAACCAATGTGGCGCGGGTGACACCAGAAAAGCCAACCTTTGTGGAAG
GACCAAGGACATAGGCCGGGTTAACAGGTGTTACAGGAACACCATTGATCTTGAA
GenBank Accession FR807525 [GenBank]
Graphic View Graphic view of gene At1g74060
Predicted Position of Insertion Chr1:27850215 - go to primer design
BLAST e Value 4e-16
Hit Clone Code (BAC ID) F2P9
Hit Gene Code At1g74060 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Ribosomal protein L6 family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37