SimpleSearch - Line and FST details


Line specific information

 
Line ID 304D03
Vector Used pAC161
Line Availability available as T3 set from NASC (N429127)
Segregation Analysis 75:71:54
Confirmed for Hit At5g13930
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At5g13930

Sequence (A. th genome BLAST matches underlined)
>20-K015592-022-304-D03-8409
TTGATCCATGTAGATTNTCCCGGACATGAANGCCTTTACAATTGAATATCTTGCTCCCGT
TCATTTAACCTACTTCACTCTACAGAATGCTGGATACCAAAGGTTTTGTTATGTCTATGT
TATCTCTCCTATATCTACTCATATACACCTATCTTGTTTACCTCTCAACAATATCATTAC
ACGCTAATACTCGCCAATTTGGCGTATACATATATAGGAGAAGGCTGATGCTTTTTATTT
TGATGAAATCATACATGCTCATAGAGCTGAAGGACCTGCATGCATACTGGCTCTCCACCC
TGCGGCTCCTGAGAACCATGTGTTTACCGTGCAGTATGCTGACCTCTACATCCGTAACAC
CTACATACAACACTTGATCGTTCTCTACGACAAATCTAAGCTCCTGTGTTCATTTTAACC
TCATGAACCTATATCTACTGTGGCCTATATTTGCATTCACATAGTTTAGCTAACAAGTAT
TTACTATTCACAGGCGACAAGTCGACAATTCGGAAACGTCACATGCATCTGACGGAGGAA
TTCCTCAAGGAAAACCCACACATGTGTGCTTACATGGCTCCTTCTCTGGACACCAGACAG
GACATCGTGGTGGTCGAAGTCCCTAACCTATGGGATCCTC
GenBank Accession AL947440 [GenBank]
Graphic View Graphic view of gene At5g13930
Predicted Position of Insertion Chr5:4488606 - go to primer design
BLAST e Value 1e-93
Hit Clone Code (BAC ID) MAC12
Hit Gene Code At5g13930 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Chalcone and stilbene synthase family protein
Insertion Classification TS2TE (5')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details