SimpleSearch - Line and FST details


Line specific information

 
Line ID 307A11
Vector Used pAC161
Line Availability available as T3 set from NASC (N429387)
Segregation Analysis 50:45:40
Confirmed for Hit At3g54140
Parent of DUPLO pair none
Parent of pair(s) 6271, 6277, 6280, 6285, 6294, 6296, 6303, 6310, 6314, 7793, 8858, 91334

Gene hit At3g54140

 
Sequence (A. th genome BLAST matches underlined) 
>81-K015597-022-307-A11-8409
TTTGATCCATGGTAGATTTCCCGGACATGAANGCCTTTACAATTGAATATATCCTGCAGT
TTCCGGCTACCTTTGATGTTACTCTCATCATCTGCAGTTTCAAAGAGCAGAGACTTGTCC
TCTGGAACCTTAACACTTATCTTCCGAAAAGCCGCTACTATAACCTGAAAGATCCTATGG
GATCCTCCCTATAGTGAGAGNNNGCGGNNGCTCNNAGNTCTTGANGTGGTGGCCTAACTA
CGGCTACACTATGGGATCCTCCCTATAGAGAGGNCANCCACGGGACAACGCAACAGAATC
CGAAGATGAGGATGCGTTAAAGCTTCCACGCGCTAGGTTTCATCCGACGGATGAGGAGTC
TCGAGGGTATTATCTCTCTCACAAAGTG
GenBank Accession AL947774 [GenBank]
Graphic View Graphic view of gene At3g54140
Predicted Position of Insertion Chr3:20046821 - go to primer design
BLAST e Value 2e-61
Hit Clone Code (BAC ID) F24B22
Hit Gene Code At3g54140 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation peptide transporter 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37