SimpleSearch - Line and FST details


Line specific information

 
Line ID 308B10
Vector Used pAC161
Line Availability available as T3 set from NASC (N429494)
Segregation Analysis 50:47:37
Confirmed for Hit At2g02220
Parent of DUPLO pair none
Parent of pair(s) 2871

Gene hit At2g02220

 
Sequence (A. th genome BLAST matches underlined) 
>74-K015815-022-308-B10-8409
GATCCTGTAGATTTCCCGGACATGAAGCCATTTACAATTGAATATATACCTGCATGCATG
CACCTCGACACTCTGGTAGACTCACATATACCAGACATTTCTATCCTCTGCACGGAACCA
CAACACACCCTAATCCGACACAAGATTCATGAGACCAAATTGCATATCATACTATGACTA
CCCTCACTACACCAACGATTNANGNATTCCTCCAATGAATCCATTGGTCTGACCTAANAA
AAACTTTAACTGAGGCAATTCGACAAACACATCAGGGATTTCACCGGAAAACAAATTCCA
AGAAACATCAAGACGAACAAGACTTGAGAGATTCCTAATCTCACGACTCAACGAACCACA
CAGACGATTCTCTTGAATCCCTAAAAGATTCAATCTTTTCACATCAAACAAATCCTCCGG
GATGTCACCAGAAACATCCTTCATACCAACACAGAGATGCTCAAGCAAAACACATTTCCC
AAACCCCGAAATGAAATTCCCGGCAAACTAATTCACCCCACGTTTCACAACCCTAATTTG
ACCACAGTCATCGCAGACATGACACCGAATCGACCCATTGAATTTATTCCAAGAAAGATC
AAAACTCTGTAGACCCGCCACACCCATACTTCTTAGGAATCCCCCGCGAAAATCCTCACA
CCCCGACTCAGACCTTACAAATCCTTCAACCCAACAACGAAAACAACGATCAATCCTCGA
TGAACCGTCGAAAAACACTAAAAGCCCAA
GenBank Accession FR807610 [GenBank]
Graphic View Graphic view of gene At2g02220
Predicted Position of Insertion Chr2:586127 - go to primer design
BLAST e Value 4e-149
Hit Clone Code (BAC ID) F5O4
Hit Gene Code At2g02220 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation phytosulfokin receptor 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL947894 [GenBank] FR807610 [GenBank]


Last Updated on 10.06.2021 13:37