SimpleSearch - Line and FST details


Line specific information

 
Line ID 308G07
Vector Used pAC161
Line Availability available as T3 set from NASC (N429551)
Segregation Analysis 50:50:37
Confirmed for Hit At1g77460
Parent of DUPLO pair none
Parent of pair(s) 607, 88295

Gene hit At1g77460

 
Sequence (A. th genome BLAST matches underlined) 
>55-K015783-022-308-G07-8409
AATGCTGCCAGACTTTGTTCTGTTGCTTTCTCCAATAGTAACATCAGAACGAGTGCATCC
GCCTCCGGATGACTGAGGCCGTTGATAACGCTTATGCAATCTGACAGAAGCGCATCAGTT
GAAGCAGCAATTTTTGCTATCTAACATGTTATTGGATGACGAGCAACATTTAGACCTATG
CGACCCTCTCTCATCGTGAGAGGGGGTCCATCTTTGGGACCACTCTCGGCAGAGGCATCT
TCAACGATGGCCTGGACTATGTCNAATAGAGGGCATATGTAAGAGCCACCTTCCTTTACC
ACTATCTCCAGCATATAGAGACCCATAACTAGGCGATGCAATCCGAGGAGGTCACCGGAT
ATTACCCGTCTATGGGAGCCCCANTTTGACCTTGGGTCTTCTGAGACTGTATCTTTGATA
TTTTTGGAGTAGACAAGCGTGTCGTGCTCCACCATGTTGACGAAGATTTTCTTCTTGTCA
TTGAGACGGAAAAGACTCTGTATGAACTGTTCGCCCCCCTTTAACGGCGAGTTCTGTTAG
GTCCTCTATTTGAATCTTTGACTCCATGGGAATTGGGGATCCTCTATGGGATCGCCCC
GenBank Accession FR807618 [GenBank]
Graphic View Graphic view of gene At1g77460
Predicted Position of Insertion Chr1:29108933 - go to primer design
BLAST e Value 2e-48
Hit Clone Code (BAC ID) T5M16
Hit Gene Code At1g77460 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation CELLULOSE SYNTHASE INTERACTIVE 3
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR807618 [GenBank]


Last Updated on 10.06.2021 13:37