SimpleSearch - Line and FST details
Line specific information
| Line ID | 308H02 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N429558) |
| Segregation Analysis | 50:48:39 |
| Confirmed for Hit | At1g74030 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At1g74030
| Sequence (A. th genome BLAST matches underlined) | >16-K015815-022-308-H02-8409 GAGCATTTACAAATTTCGCAGTCGCGACGCCAGAGACCGAGGGTTAGATCATGCCTATGG GATCGTCCCTATAGTGAGAAGGCGATGAAAACTAAGGAGTCAAAAGAACCATACTTAAAC CGGTTCATTTTCCAATTGGTTGACTGTTAAAGAGAAGTTTCTGGTTTTGGTTTGGTTCGG TTCGGTTCGGAACAATTCAAATAAATAAAACAAATCAAAAATATTCACTATGGGATCCTC CCTATAGTGAG |
| GenBank Accession | AL947987 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:27841973 - go to primer design |
| BLAST e Value | 6e-80 |
| Hit Clone Code (BAC ID) | F2P9 |
| Hit Gene Code | At1g74030 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | enolase 1 |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At5g18760
| Sequence (A. th genome BLAST matches underlined) | >16-K015783-022-308-H02-8409 TATCATGAAATTTCCCGGACATGAAGCCATTTACAATTTCGCAGTCACGACGCCAGTAGA CCTGAGGGTTAGATCATCGCCTCATTCCAGCAAGGCGTTGCCCGTTCACGCAATGAATAC TCTCGGCACAGACCACCTGACTCTAAGCACGGGAACAGGGTGGCAGGTCGAACTGACTGT TATAGACAAGCATCATTATCTAATCAAAGATACTGCCGACCCTGTTCATATGGAGTAAAA TTGGACAACATCACCTGTGCTCTGGGATCCTCCCCTCTCCTAGAGAGAGCAAACCCCTAT CGAGAGGCTACACAAACAAGGAACACTCTCTTCAGAGAGATTTTCATCATACCAACGGAA CCCCCCATAGCTAGGGACCTCTCGACAGTAGATAACCTTGTCAGGTATCTACCTACCATA TTTGTTCTCCCTTCGCAAAATATACTACTCGTGGAAAAGATCTCTTGCTGCATCTATGTC CTCCACCCTATAGGGAGAATTATGATGAGAAGCTCTTCAATTCAGCCGCCCAGAAATTGT GGTCACGCGAAAGATTCTTCTACTGGTACATCTTCAACCTCTTCTTCATCGCAGGAATTC |
| GenBank Accession | FR807619 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:6260831 - go to primer design |
| BLAST e Value | 2e-12 |
| Hit Clone Code (BAC ID) | T1A4 |
| Hit Gene Code | At5g18760 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | RING/U-box superfamily protein |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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