SimpleSearch - Line and FST details


Line specific information

 
Line ID 310D02
Vector Used pAC161
Line Availability available as T3 set from NASC (N429702)
Segregation Analysis 50:15:11
Confirmed for Hit At3g16360
Parent of DUPLO pair none
Parent of pair(s) 57899, 92021, 92022

Gene hit At3g16360

 
Sequence (A. th genome BLAST matches underlined) 
>12-K015791-022-310-D02-8409
TGTCATGTGATTTCCCGGACATGAAGCCATTTACAATTGAATATATTGTGTACTATGAAG
CAATGGCAGATTAATCTTTACATTCTTGATTCAGGAGAGCATCGTTGATACAGTTTTCAG
CTTTACTTGCCCCAATGCTACAAAAAAATGAGATGAAACATTTGACAGTATAACTAACGA
TCATAGAATCTAATTATTTCTAGGTAAAGTAGATTCTGTTGTTGAATCTTGAATAAGATC
GGTAGTAATTTTAATGTACTTTTGCGTTACATTCTTTTATCTTATAAACATTTAAGTATT
CGCATTTCTTTAAGTAAAATTATTTCTTGAAGGCGTAATTACAGATAACTGCTATAGATG
GTCCAATACTAAATAAAGGATATTTCCTCTATGGGATCTCCCATATAGTGAGAGTGCGTC
GTAGCTATTTGTGGGATAACGATCGTAGTCCGCTAGGACGCTGAGTTTACAAGTATCCTA
AGTCGGATGTGGGCAAGCAGGAGCATTCATGAAAGCTGAAGGAGGACACTTCTTCGCTAG
TAGGCTCTCGGGGACCAGCCTTATGGTTCGTAGTAAGAATTCTGGCGCTCGCTTCATCGC
AAGCAATGTGGTGTTGACATTGTTGTAAAAAGTGCGGAATTCAGCCCTCAAAATGGTGAC
C
GenBank Accession AL948171 [GenBank]
Graphic View Graphic view of gene At3g16360
Predicted Position of Insertion Chr3:5555096 - go to primer design
BLAST e Value 9e-76
Hit Clone Code (BAC ID) T2O4
Hit Gene Code At3g16360 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation HPT phosphotransmitter 4
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR807653 [GenBank]


Last Updated on 10.06.2021 13:37