SimpleSearch - Line and FST details
Line specific information
| Line ID | 310H05 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N429753) |
| Segregation Analysis | 53:9:8 |
| Confirmed for Hit | At1g07230 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 79, 3636, 3660, 56563, 91369 |
Gene hit At1g07230
| Sequence (A. th genome BLAST matches underlined) | >40-K015787-022-310-H05-8409 TGATATGAAATTTCCCGGAATGAAGCATTTACATTGAATATATCCTGTAAAAACAAATAA CATGTTGATCATATATATCAACGTAGGACTGTATAAACTATGACAAAGATCTATGTATGG ATCGTACATGGACGGTAGTTGGAGTCGGCGGCTCCCCTATGGGATACTCCCTATAGTGAG AAAGAAGAAACNNAGTTGTACGGAATTTGGTATAGGTCAAAAACGAATAGGTACCTCCCG ATATTAAAGATCNCNNATACGGAAGTATTTCTCACATGTACCAGACCATGCATCTCTCTT TGTAAGGAACTGAGACTTTACGTTGAAGAGTTTCTTCACCGTAGCAAGGATAGAAGAATG CTCAAATTGTGAATGTGGCGTTGGACCTTCACGTTCATGTATCACTCGCACGAAATCAAT CCCACACCAGCCTTATCAAAATCAAAAAGACCGGAGACTAATCTACCTGTACTGATGTAA CCCCCATTCCAGTAACACATTAGAATCAACACTTAATGGGCTTAACATGAA |
| GenBank Accession | AL948239 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:2221037 - go to primer design |
| BLAST e Value | 7e-92 |
| Hit Clone Code (BAC ID) | F10K1 |
| Hit Gene Code | At1g07230 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | non-specific phospholipase C1 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit K6A12
| Sequence (A. th genome BLAST matches underlined) | >40-K015791-022-310-H05-8409 GCGTTTGATACGTTACTAGCCAAGGGCGATGCAGCATTCGGCTAACGCTTATATGGATCA AGTTGTATATTTGAAAATACCACAATTCGGGATAAAAACGTATCTAACACATTATTTGCA CTGATTTTCGCCGCTTTCCTAGATTATGGCCACATTGCACATCTTCACAATCGGCAGATT GTGTAATTTACAATTACACATCTTTTTTTCTTCTACCGCCATACGTTCAATTTTCGCGAG CACACCCACCTCCCAACATATCTGATTGATCCCCCGCTCGAAACGGTGATGAATGGACTA TCGACACTCCGAGATTAGTGGCTAAAAAGCCATT |
| GenBank Accession | FR807664 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:20474118 - go to primer design |
| BLAST e Value | 2e-42 |
| Hit Clone Code (BAC ID) | K6A12 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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