SimpleSearch - Line and FST details


Line specific information

 
Line ID 311F09
Vector Used pAC161
Line Availability available as T3 set from NASC (N429829)
Segregation Analysis 50:49:48
Confirmed for Hit At2g32560
Parent of DUPLO pair none
Parent of pair(s) 10822

Gene hit At5g18790

 
Sequence (A. th genome BLAST matches underlined) 
>70-K015792-022-311-F09-8409
TGTCACTGAGATTTCCCGGACATGAAGCCATTTAGCCATCATATTCAGATGCATCATACT
CATTCCCGTTTCATCTCCGCCGCCGTATCACCACCGTGTTGTCGCCTTTTGCCATCGGTA
AGTTTCTTTAGTTTCTGATGCTTTCAGCTCTGTGTTTGAGCATCTGTGAGTATTTTTTCT
TGTTGAAGTTGCATTTCGGTGAATTCTAATGTTTCATTTTGTTATTAGCGCAAGTTTTTT
TGCCCATTTTGGATTGAATGATCTATGGGATCTCGCNTATAGTGAGAGGCANANGCATCT
TCATCGATGCCCTCTCCTTTATCGCAATGATGGCATTTGTAGGAGCCACCTTCCTTGACC
ACTATGTGCATGAGAGATCGATCGATAGCTGATCAATGCAATCCTAACGCGATATTCGCA
TATTACCCTTTTGTTGATAGACTCCATTGCCCTTTGGTCTTCTGAGACTGCATCTTTGCT
ATTTTTGGAGTAGACAAGCGGGTCGTGCTCCACCATGTTGACGAAGATTTTCTTCTTGTC
ATTGAGCCGTAAGAGACTCTGTATTAACTGTTCGCCAGTCTTTACGGCGAGCTCTGGTTA
GTCCTCTATTTGAAATCTTTGACTCCATGGAAATTGGGGTACCCTCTAGGGAATCTCCCC
AATAGGGAGAGGTATTAAAGCGAGGGAAAGGAAGAGTT
GenBank Accession AL948335 [GenBank]
Graphic View Graphic view of gene At5g18790
Predicted Position of Insertion Chr5:6266925 - go to primer design
BLAST e Value 8e-101
Hit Clone Code (BAC ID) F17K4
Hit Gene Code At5g18790 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Ribosomal protein L33 family protein
Insertion Classification TS2TE (5')
Confirmation Status unknown

Gene hit At2g32560

 
Sequence (A. th genome BLAST matches underlined) 
>70-K015788-022-311-F09-8409
TAGCTGAGCTCCGCATCATAGCATGACAACATGAACCCTACATGTCCATTCTGCTCTTTC
ACCAAAAAAAAGCCTCTTAGTACTTTAATCAAATCCATAAAGCAAAAATGGAGCAACTAT
GTTTATGAAATGATTACCTCACGGTTGTAAACTTGAGCTGGGAACCAAAAACGACCTGTT
TCAAGGGAGAGGTAGCAGCTCATGCTGGAATCAAGTGGCAGAGAAGATGCATATCCCCTC
CTTTGTTTATCCTCTCGGAAAACGGATGAAAGAGATCGGATCAGAGAGATGATTTTGGCA
AAACCAAGATTCCCAGTTTGATGATGAGGAGAATCAAGATGATATGTGGAAGAGGAGATA
TAGCATTGCCACTCTCTGTGAGCAGCAGGGCCAAGGATTTTGCCCCATTTGGTCTTCAAA
TGTTTCTCCCATAGATGATCACTAACACATCTCTCCCTCAAGGAGCTACAAACCCTATGG
GenBank Accession AL948334 [GenBank]
Graphic View Graphic view of gene At2g32560
Predicted Position of Insertion Chr2:13825553 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T26B15
Hit Gene Code At2g32560 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation F-box family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37