SimpleSearch - Line and FST details


Line specific information

 
Line ID 311H11
Vector Used pAC161
Line Availability available as T3 set from NASC (N429855)
Segregation Analysis 100:89:69
Confirmed for Hit At1g04280
Parent of DUPLO pair none
Parent of pair(s) 92057, 92058

Gene hit At1g04280

 
Sequence (A. th genome BLAST matches underlined) 
>88-K015792-022-311-H11-8409
TCTCCCACTCTGCGAGAGATGAACTAGAGAGATCACGCTCAGCTTCATTCTCCAATACTC
ATCACATTCTCATCATACCCTTTTGTTTTCAACAATATCCATTTGCTAAATTGCATAGNT
GTGGGTATTCTTTTGAATCCTCAAATCCGAGCTGCCTTGCTGCATTTTTAACATATTTAT
GATTACCCCAAATTGGTTCCAAAATTATGTTTGGGATAAAAAATTCCCAAGGGGCCCCTT
TTTTTGTTGGTTGGGGAAAAGGCCTCCCTTTGGGACCCCCCCAAAAAAGGGGGGGAAGAN
NNNNNNNNGGGGGGGGGCCCCCTCCCTCTGTGGGGGGGAGAGAGGCTCCTTCTGTGGGAA
AAAACCCCGAAGAAAGAGGGCCGCCCGAAGAGGGGTTTGTCCCCCCCCCCCCCTTTATGC
GGGGGAGACCGGGGTCGAATTCCCTCCCCATATTCTGGGAGCAAACTACCCCTCCCAACA
AGAGATAGGGTGCGCGCGTGACACTATGCAAGCGACGACCCCNCCCCACGCGATAAGAGA
GGCGAGAAATCCCTTTTCGCCCCATTCTCGCTCCCGCCACAGGGACATAACACAAAATTA
TTA
GenBank Accession AL948374 [GenBank]
Graphic View Graphic view of gene At1g04280
Predicted Position of Insertion Chr1:1145444 - go to primer design
BLAST e Value 7e-67
Hit Clone Code (BAC ID) F19P19
Hit Gene Code At1g04280 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation P-loop containing nucleoside triphosphate hydrolases superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL948374 [GenBank]


Last Updated on 10.06.2021 13:37