SimpleSearch - Line and FST details


Line specific information

 
Line ID 312E07
Vector Used pAC161
Line Availability available as T3 set from NASC (N429911)
Segregation Analysis 50:39:29
Confirmed for Hit At5g65340
Parent of DUPLO pair 12885
Parent of pair(s) none

Gene hit At5g65340

 
Sequence (A. th genome BLAST matches underlined) 
>53-K015817-022-312-E07-8409
GAGGCGTGCGCAGGATGCGCTCTCGAATCAGCAATAACGACGGATCATGATTCACATGAA
GATTCTTCCTCTTCACTTGCTTAAACACCTTTATGGAACATGTATTGCAACGGTCAGAAA
CGTTGGATTCTCCATCAAACGAGAGCCTTCGAAGTCTGAGCTATGGGATCCTCGCTATAG
GGAGAGTAACAAGATGGGATGAGAAGTTGGGCGATGGTGCGAAGGAGCCGCCATGAACGA
ACTTGTTTATGGCAGTCTACGGCTACCGTTGCGCTTGTGGTGGTTGAAGCTATGGGATCC
TCCCTATAGTGAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNANNNN
NNNNNNNGNNNANNNNNNNNANNNGNNNNNNNNNNNNNNNNNNNNGNNNCNNNNNNNNNN
NNNNNNNNNANNNNNNNNNNNNGNNNNNNNNNGNNNNNNNNNANNNNNNNNCNNGNNNNN
GNNNNNNNGGAGGAGCAGGAAGAAAGGGGAGAAGAAGAGAGGGGAGAGGACAGTAGGGGG
CGGGGAAGAGAGAGGAGGACGACAAGGGAAACGGAGGAGCCCCAAAGGGAAGAACACCAA
GGAGAGGACAGAGCCAGCAGAGG
GenBank Accession AL948449 [GenBank]
Graphic View Graphic view of gene At5g65340
Predicted Position of Insertion Chr5:26114132 - go to primer design
BLAST e Value 3e-54
Hit Clone Code (BAC ID) MNA5
Hit Gene Code At5g65340 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation MIZU-KUSSEI-like protein (Protein of unknown function, DUF617)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL948450 [GenBank]


Last Updated on 10.06.2021 13:37