SimpleSearch - Line and FST details
Line specific information
| Line ID | 312G11 |
| Vector Used | pAC161 |
| Line Availability | not available |
| Segregation Analysis | unknown |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 7966 |
| Note |
Gene hit At1g33440
| Sequence (A. th genome BLAST matches underlined) | >87-K015817-022-312-G11-8409 TGTCCTGTAGATTTCCCGGACATGATGCCATTTGCATATGGCATCTTCTAGTACTACTGA GGTACTGTATATATACTACTATTTATAGGGGAAAGCCTTTTATTTCTGTATCATCTTGCG TCTACGCAAAGCCTTGGTATCTCCATAGCGGCCTCCCTGTAACGATGTGGCTGTCTCCTT GAACATATGCTTTTGCCATGAGAGTGAACCTTGACTTTTGTTGAATGCCGGGGCTTGAAA TATGGGGGCTTCTTTTCCATCGTTTTGGGCCTTTGTAATGTTTCTGAGCCCATCTTCACT TTATCTTCCTCATTCCTCTGTTTCTCTTTCGTCGATCCTATGGGATCCTCCCTATAGTGA GATTACCCCATGTTTTGCTTTTCGAAGCCGTGTACTTAAATTGATTGGTTGAGCATACCG ATATCTATGGTCAGGCTTCCAAGCTTTCTAGATGATGGCGATCCCAGCTGTTGAAAACAA CTTGATACCATACGGATTCAACGAGATGCCTTTCCCTTTGGCAAAATCCGCAAACCGCGT CACTAACTTCATAGGAACGGGGTATTCTCCTCTCGCTTCTTGGCGGGTTCCACCCCGATT CCTACCTGGGAAACTTTCCTACCATGCTCGTTTTTGGCGCCCCCGAAATCCCTGTATGTT CCTCTAGCTCTC |
| GenBank Accession | AL948489 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr1:12130406 - go to primer design |
| BLAST e Value | 2e-83 |
| Hit Clone Code (BAC ID) | F10C21 |
| Hit Gene Code | At1g33440 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Major facilitator superfamily protein |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | unknown |
Gene hit At5g38396
| Sequence (A. th genome BLAST matches underlined) | >87-K015821-022-312-G11-8409 TGTCATGAAATTTCCCGGACTGAAGCCATTTACATTGAATATACTCATACTCTTCCTTTA ACCGGAACCGTGCTGGTTCAGCTAACCGGTCTAACGTTCGATACGTTCTCTGAGCTTTGG TCTAACCAGGCGGTTCAACTCGACACGGCGACGAGACTTACCTGCTTGGTTTTCCTCTCC TTCGTTTTGACCCTCTACGTGGCTAACCGGTCTAAACCGGTTTACCTATGGGATCCTNCC TATAGGGAGATCTACTCTATATATGTTGTATGTTGCTCATTGTGATGAATAACACGAATC TCTTTAGACTCTGAAATCCTTTTAGAGAAAGTTTTGATTATTAAATTGACGCGAAGATGA GTTGGTAAAACAGAGAGAAACCCTAATTAGTTAACAACGTAAATAGCCAAAAGGAAACTT CTGAACTAAGAAATCTCAAATAAAGGAGAATTTAGTAAAGTTCGACACCTACCTTGTTCC TATGGG |
| GenBank Accession | AL948490 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr5:15373083 - go to primer design |
| BLAST e Value | 7e-129 |
| Hit Clone Code (BAC ID) | MXI10 |
| Hit Gene Code | At5g38396 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | F-box/RNI-like superfamily protein |
| Insertion Classification | 5' region |
| Confirmation Status | failed |
|
Last Updated on 10.06.2021 13:37 |
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