SimpleSearch - Line and FST details


Line specific information

 
Line ID 312H09
Vector Used pAC161
Line Availability available as T3 set from NASC (N429949)
Segregation Analysis 50:47:33
Confirmed for Hit At2g45160
Parent of DUPLO pair 6762
Parent of pair(s) none

Gene hit At2g45160

 
Sequence (A. th genome BLAST matches underlined) 
>72-K015821-022-312-H09-8409
AGAGACAGTACAAGTTCTTTCCTTTGCCACACATGACAAGGGCATGTGACCTGATACAAC
ATCGGATTTTCATGGCCTATGGGATCCTCCCTATAGTGAGAACTGACCTTCCGCCCTCTG
AGTCGTACTCGGCATATAAAACCCACGTTGCGTCTATAAGATTCGCCACGGAGGAGATCT
TTCCATCCACCGCTGTCGCTTCATCGACAGCTACTCTATCGATGGGTGAACCCAAAACCT
CTCGATACTCCAAGTCGCCTGGATCTGATTAGGATCAAGAGACTCAAGCAGAGAAGCGTG
CTATTGCAGCAAATGAATCACTGCAGATGGAAACGGCGCGAACTATACGGCCACATCCTC
TGTCTGAGCAAACAACGATCGCTGGTGACCAATGTTTAAGGTATCTGAGGATTAACGGAA
GAGACCCGGAGGCGACGGATGATACTGGAAGATTCTCTGCAGATGCTTCTTTGTCCAATG
GACGACAGAGACTGCCCCATAAGATGCGATAAGAAGAGACTCTACGCTTACTAACTCGAA
TCCTACAGGAGTCTTGACTTCTCCGGCGAAAGTCTTGAGATTTTCCTCTGTGTACGCAGC
TCGAACTCTCCGCATACTGTAAAAGGCGGAAGAGACATACTGCTAACTACAGAGCGATGC
ACGTNCCTTTTTTTTACGTCAAATCCGGGAGGGAGGTCTGGCATAAAAGACAACCATGCC
CTCCATATCCAACGCGAATCGATAATGGGGATCCGATCAAACCCTT
GenBank Accession FR807705 [GenBank]
Graphic View Graphic view of gene At2g45160
Predicted Position of Insertion Chr2:18618179 - go to primer design
BLAST e Value 2e-79
Hit Clone Code (BAC ID) T14P1
Hit Gene Code At2g45160 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation GRAS family transcription factor
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR807705 [GenBank]


Last Updated on 10.06.2021 13:37