SimpleSearch - Line and FST details
Line specific information
| Line ID | 314B04 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N430064) |
| Segregation Analysis | 37:32:25 |
| Confirmed for Hit | At4g34960 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 5462, 5528, 7582 |
| Note |
Gene hit At4g34960
| Sequence (A. th genome BLAST matches underlined) | >26-K015819-022-314-B04-8409 TATCCTGTAGATTTCCCGGACATGAAGCCATTTACAATTGAACATTTTATCTCCAAGTAC ATTAAAGTGTTTAAGTGAGTATCACACACATTATAAGCTCCATGGCAAATGCTTGTCAGA TTCTTCTTATGATGGTTTTGAACTTTGGGTTATTGTACCAGAATAACATTGTTGAACTTG GGTTAGCTTTCTATTTTCCGGGTCTGACATATTATTGTTAGGTTTCTCTTTGTTGAATTT ATGGTTGCTTGGTTAGTGAGAAGGTTTAATAGAGGAGCAGCAGAATGTGATATGCCTTGT GTATGTTTGCGCCTGATTTACTTCCTCTCTTGATACTTAGGATGAGGAGAAGCAAGTAAT TGAAGATCATGAAATCACCAACAGGGTTTTTCTCGATGTTGATATTGATGGCCAACGCTT AGGTAAATGGACTTGACATATTGGCTTTTTAGTGTAATAGATGTTTTTGGAGTCAAACTG TTCTTTAATTATGTGTTCTATGGG |
| GenBank Accession | AL948650 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:16649138 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F11I11 |
| Hit Gene Code | At4g34960 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At3g44460
| Sequence (A. th genome BLAST matches underlined) | >26-K015823-022-314-B04-8409 TGTCATGTAATTTCCCGGACATGAAGCCATTTACATTGAATATATCCTGCCGACGCTGCC GCTTTGCACCCGGAGGAGCTTGATTTATACTTCACATAAAAACCACTAACCCATCACAGC TTAGTTATGAACTTATTATCATTTAAGCTATATTTGTTAGATAACGATATTGACAACTTT GAATCCAACAATATCACACATAAATCCAAAATGATGTATTTTGATACATTCATATTCGTT AAGGAACCGGTTTAGTACATATGGAAATTGGAGTATTACCTCTTGGCGTCTTTTCTTCTC ATTTTCCTCCTATGGGATCCTCCTTATAGTGAGACTTAGGATGAGGAGAAGCAAGTAATT GAAGATCATGAAATCACCAACAGGGTTTTTCTCGATGTTGATATTGATGGCCAACGCTTA GGTAAATGGACTTGACATATTGGCTTTTTAATGTAATAAATGTTTTTGGAGTCAAACTGT TCTTTAATTATGTGTCCTATGGGATCCTCCCCTATAGTGAG |
| GenBank Accession | AL948651 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:16080365 - go to primer design |
| BLAST e Value | 3e-103 |
| Hit Clone Code (BAC ID) | F14L2 |
| Hit Gene Code | At3g44460 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Basic-leucine zipper (bZIP) transcription factor family protein |
| Insertion Classification | CDSi |
| Confirmation Status | failed, line belongs to a contamination group, please check line 314D04 |
|
Last Updated on 10.06.2021 13:37 |
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