SimpleSearch - Line and FST details
Line specific information
| Line ID | 314F05 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N430113) |
| Segregation Analysis | 100:96:94 |
| Confirmed for Hit | At1g74430 |
| Parent of DUPLO pair | 2725 |
| Parent of pair(s) | none |
Gene hit At1g74430
| Sequence (A. th genome BLAST matches underlined) | >38-K015819-022-314-F05-8409 TTAGGAATTAGAAATTTTATTGATAAATGGATTTTACAAATACAACTACATGCTACGGGT TTCTTATATGCTCAACACATGAGCGAAAGCCTATAACAACCCTAATATACCCTGATCTGG GAACTACTCACGCATGATTATAGAGAGACATAGATTTGTACAGAGACACTGGTGATTGCT GCTGGCATGCCTGCACGTCGACCTCCTGCCATACTATGAGATCCTCCGAAATAATGAGAC CATCCTCTGACCCTTGACTCTTCTAGATCTACCCGCCACACAGCTAGATGTCACCTCCGC ATCCTCTACGTAGTCTGATACACCGAGCCCTACTTCTTCTTCTTTTTCCACCTGGACCTC TACTGGCTCTGCACGTTTCCTTAACAAGCTCGCTGCTGGAATCTCGGCAAGAAAACGCGG ACTATGGGATCCTCGCGTATAGTGAGATTTTAACTTGTGCTATGGGATCCTCCCTATAGG GA |
| GenBank Accession | BX890967 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:27976382 - go to primer design |
| BLAST e Value | 6e-46 |
| Hit Clone Code (BAC ID) | F1M20 |
| Hit Gene Code | At1g74430 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | myb domain protein 95 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At4g28020
| Sequence (A. th genome BLAST matches underlined) | >38-K015823-022-314-F05-8409 GATCCTGTAGATTTCCCGTCAGGATTGTCATTTCCGACGCAGCAGCGGATAGCCGCTATC GACATCGGAGAGCACGCCGAACGCGGTTACCTATGGGATCCTCCCTATAGTGAGAGACAG CCGCTCCCGTAATTACCAGTTGCTACCGATTTGACTCCCGGAGCGATACATTCCTCGACG AAGACGGAACGTTCCACTCGCTCGTCGCAGCAAAGAGCCCATCTATGGCTACGTCAAGAC GCTCCCACGGCTCTACCTCGGCGGATTTTAGCCTTTACACTCGCCGTAGTATCTGTATCC GCTGCCTTCTCGCGTAATCTCTTTCTCTCTACCTCTCTGTCACTTCCTCTTCCCAATACC TGTTATTGAGCTGGTTTCTAGAAACTAACACTTTATTGAGCATGTTCTTGCGAAGTGTAT AGATGGCGACTACGACAAGAAGATTTGGAGAATAGGATCACGGAATTTGATAAGTCTTTG GGATCTACCTTGGAAAAAAGAGCTTCTGAGAGAAAAGGTCGAGTCTGAGCTCAGCAGGTG AGTTTTTTTTTAACTTGCACTATGGGATCCT |
| GenBank Accession | AL948705 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:13935327 - go to primer design |
| BLAST e Value | 2e-160 |
| Hit Clone Code (BAC ID) | T13J8 |
| Hit Gene Code | At4g28020 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | tRNA-thr(GGU) m(6)t(6)A37 methyltransferase |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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