SimpleSearch - Line and FST details
Line specific information
Line ID | 315G08 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N430224) |
Segregation Analysis | 50:17:11 |
Confirmed for Hit | At4g07950 |
Parent of DUPLO pair | none |
Parent of pair(s) | 12483 |
Gene hit At4g07950
Sequence (A. th genome BLAST matches underlined) | >63-K015820-022-315-G08-8409 ATGCCATGTCGACTCTATGGGATCCTCCTATAGTGAGATTGCTCAAACCATTGCGATGGG ATCCTCCCTATAAAGAGGATTCGACTTTATCTCAACCCGACTCTCGATATTGGCAACGTA TGGACATGTGGAACAGAATAATCTCGAACTCCCACCTCCCTCGTATAGCAGCAGATTCCC ACATGTGGGACAAAACTCCATCTTCCACCTCAGCGATCTATTCGCTGCAGAATCATCCCC CACAAAAATCTATTCGTAAAACTATGATATATACAGATCTATATAGACAAACAGAGGGAA GGGGTGTTTTTAATACATTGATCTACTGTGTTCGTGTAACAACCAGCTTTTACTTTAATA GCAAGGCAGGACATGAAGCAACTTATAATTCAAGTAATCCATTCTTAACCGGAAATAACC AATACTTTTCCATAAATTCAACTTTACATTCGTTAGACTGTGGTTTAATAATGAAACCAA CTCCAGAATCTATGGGATCCTCCCTATAGCGAGACCCTTCGTCTATATAAGGAAGTTCAT TACATCGTGGAAAGGACCCGGTACCGGGCGGATCAGATTGTCGTTATCCGGCCTTCGGCT TAAACTATCATGGTTTGACAGGATATATTGGCGGGGCAAACCCTAAAGAGAAGAGCGGTT CATTAAAATAATCGGATATTTAAAAAGGCGTGGAAAAGGGTTATCCCTTCCGCCCATTTG TATGGGGCTGGCAACCCACAGGGGTCCCTCCCGGAAGGGGTTGGGATTTCCCGGCGATAA ATGACTTTTGGTCCACCCCCC |
GenBank Accession | AL948841 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr4:4799072 - go to primer design |
BLAST e Value | 5e-176 |
Hit Clone Code (BAC ID) | F1K3 |
Hit Gene Code | At4g07950 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | DNA-directed RNA polymerase, subunit M, archaeal |
Insertion Classification | CDSi |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Gene hit At5g31719
Sequence (A. th genome BLAST matches underlined) | >63-K015824-022-315-G08-8409 ACAGCGCTTATTCGAGATGCGTCATCTTGAGACGCTGATGTCTGACCCGTATGTCACTAA ATAGAAGGAAACGCTGACATTTCTCTCCACTCTGCAAGAGGAGTTGTATCTGGCACTTAC TGCAGATGAACTGGAGAGGGAACGGTTGGAGTTCTTGACTTTTTCAGATAACGAGCAGCG TTACCAGCTATCTATCATGAGCTTGGAAGGATTATTTGGTTTTCCTATGGGATCCTCCCT ATAGTGGAGACCTCCCTATAGTGAGAGTTTCTACTACACCGTACATCTGAGGTCGCCCGT GTACCAGCTCATACTGGAGTATCAGAGCACACTATGGACAATCGTTATACTTCTCACAAT CTCCTTCTTAGCCGATGATCCCTATAGCGTGTTTATACATTCAGCATAACATTCTTTAGA CTTGGGACATATACTGCATCCCTCTCCAACTTCCATTGGGATCCTCCCTACACTGAGCAA ATCACTGCCCCAATCCTCTCAATCCAGCTGTTCGATCTCCACTCCTGGAAGGCCGTGCAG CGTGTACCACTAAAGACGCTCCTTTTCCTCTCCCACTTTCGACCCCCCTATGTTTTATCG TCTTCTGATTCTTAG |
GenBank Accession | AL948842 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr5:11691012 - go to primer design |
BLAST e Value | 5e-68 |
Hit Clone Code (BAC ID) | F28N5 |
Hit Gene Code | At5g31719 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | |
Insertion Classification | TS2TE |
Confirmation Status | unknown |
Last Updated on 10.06.2021 13:37 |