SimpleSearch - Line and FST details


Line specific information

 
Line ID 319B08
Vector Used pAC161
Line Availability available as T3 set from NASC (N430548)
Segregation Analysis 50:37:34
Confirmed for Hit At5g13110
Parent of DUPLO pair none
Parent of pair(s) 256, 7167

Gene hit F17I5

 
Sequence (A. th genome BLAST matches underlined) 
>58-K015856-022-319-B08-8409
GATCATGTAGATTTCCNGGACATGAAGCATTTACTTCAGATTGTATGGTATTATGGAGTC
ATTAATTAGTGTAATCTTCAAGTTTGGAAAGTAAGATTATTAATTTGCGATAAAACCATA
ATTAGCTATGGGATCTGCCCTATAGTGACGAAGAAACCATTATTATCATGACATTAACTG
GAGTGCACCCCATTTCACCGGACAAGTCGGCTATGGGATCCTCCCTATAGTGAG
GenBank Accession AL949234 [GenBank]
Graphic View Graphic view of sequence AL949234 of line 319B08
Predicted Position of Insertion Chr4:16245842 - go to primer design
BLAST e Value 2e-36
Hit Clone Code (BAC ID) F17I5
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At5g13110

 
Sequence (A. th genome BLAST matches underlined) 
>58-K015860-022-319-B08-8409
TGTCCTGTNATTTCCCGGACTGAAGCCTTTACATTGAATATATCCTGGATAGTTTCACTA
TTGAATTGTACAATTGGCCGCGGTGGAACGAAAACTCACGTTAAGTGGATTTATTCACTT
GAACGCAAGTGGATTTATATGTGTTCAAATATAAGGTTTGAGACATCGGAAGAACAGATA
AGTTCTCGCACTATGGGATCCTCCCTATAGCGAGAGGATCCTCCCTATAGTGAGAGGGGT
AATATCTGGAATGGCTCTTTTTG
GenBank Accession FR807827 [GenBank]
Graphic View Graphic view of gene At5g13110
Predicted Position of Insertion Chr5:4160610 - go to primer design
BLAST e Value 2e-06
Hit Clone Code (BAC ID) T19L5
Hit Gene Code At5g13110 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation glucose-6-phosphate dehydrogenase 2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37