SimpleSearch - Line and FST details


Line specific information

 
Line ID 320A07
Vector Used pAC161
Line Availability available as T3 set from NASC (N430631)
Segregation Analysis 50:49:38
Confirmed for Hit At3g44870
Parent of DUPLO pair none
Parent of pair(s) 96557, 96565, 96573, 96579, 96582

Gene hit At3g44870

 
Sequence (A. th genome BLAST matches underlined) 
>49-K015944-022-320-A07-8409
TTTTTCCCGTGTGATGAAGTCNACATGTCTCTCTTTTAACTCCTGTCTTGTGATGATTTC
TTTATATGTGCGTGAGGATGTGATGAATGTTTTAGTTTCAAGCCTTTGTGCTTATTTATA
TCTATCAATCGGCTTGCCATTGAGGGTTTGAGTATTGCTATGGGATCTCCCCTATAGTGA
GATTNATATCTATCNATCGGCTTGCCTTTGAGGGTTTGAGTATTGCTATGGCCCCCTCCC
TATAGTGAG
GenBank Accession AL949341 [GenBank]
Graphic View Graphic view of gene At3g44870
Predicted Position of Insertion Chr3:16382289 - go to primer design
BLAST e Value 9e-76
Hit Clone Code (BAC ID) F28D10
Hit Gene Code At3g44870 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g66540

 
Sequence (A. th genome BLAST matches underlined) 
>49-K015948-022-320-A07-8409
GTTGCCAATGGGGGACCTTCCATTACTATAGCTATCGACATGCCCAAAAATTACTTCAAA
AGTAACTATGGCTTATTCATAAAACCATGCTTTGTTTGGGGTGTCATATGTACAAAAATA
CACTGGAGGATTCAAACAGGGTTTACCAAGGAATTCAGTATTATAACGCAAAACTTCAGT
GCTGATTTTAATGGGTGCTATTATAATTCGCTGTGATTGGAATAAAATATTATAATTGAC
CACCCCAATCTTAATAAACTAATAATCTGTAGACAGAATCATAGAAAGAAAAAAATTAAA
CTCCTTGACATCGTCAACAGCTGTCTGTATTTATCCGTGGTANAAAATTGAAAAAACATA
ACATTTACTCCCTGTGTTTTTCCCACAACATGGAGGAGGCCCCCCCCATATTAAACATAG
GCACTTCTATACCGGAGAATCGACTGGCCAGGGGATTCTCTGCGGACATCCCGGGGATAA
ACATAACGGTGACAATACTGC
GenBank Accession AL949342 [GenBank]
Graphic View Graphic view of gene At1g66540
Predicted Position of Insertion Chr1:24824298 - go to primer design
BLAST e Value 3e-29
Hit Clone Code (BAC ID) F28G11
Hit Gene Code At1g66540 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Cytochrome P450 superfamily protein
Insertion Classification Promoter
Confirmation Status unknown


Last Updated on 10.06.2021 13:37