SimpleSearch - Line and FST details


Line specific information

 
Line ID 320E07
Vector Used pAC161
Line Availability available as T3 set from NASC (N430679)
Segregation Analysis 33:30:29
Confirmed for Hit At1g48500
Parent of DUPLO pair 12778
Parent of pair(s) none

Gene hit At1g48500

 
Sequence (A. th genome BLAST matches underlined) 
>53-K015944-022-320-E07-8409
GACATGAGCATTATGCTTTGAAGCTATGGTGATCCTCCCTATAGTGAGAGAGACGGCATG
CGTTTATTAGAATACCTCGGGTATGTAAAAGGGTGAGAATACGAGTTATATCCAGACATT
CATAAGTATGTGACTGCCTACCAAAGGGTGGCCCCCTCCAGAGATTGAGATTCCGTGCGA
TAATGACTTCTGTTCAACCACCCGAACGTCGGAAAGCCTGACGACGGAGCAGCATTCCAG
AAAGATCCCTTGGATCGTCTGGGTCGGCTATGGGATCCTCCCTTATAGTGAGACTTTAGG
GGAATCTATGGGATCCTCCNTATAGCGAGATAGACTCATTGATTAAGTTAGGATCATGTT
GGGTATTAAATTTAGATCAAGTTACAATTTGGATGAATAATTTACTTACCCACGAGGAAT
TTAATAGTTAGTTCTTGTCTTTTTATATTCCGAAACGTGCCATTTCTTGAAAGTATTTGT
ATGATCACTATTTTCCCCAGTGTGTTTGGCTTTATGCAGATTTGTTCATTGTTGATGAAT
CTAATGTTAAGAGTCGTCCACTTTAGCATAGCTATGGGATCCTCCC
GenBank Accession AL949410 [GenBank]
Graphic View Graphic view of gene At1g48500
Predicted Position of Insertion Chr1:17932393 - go to primer design
BLAST e Value 2e-135
Hit Clone Code (BAC ID) T1N15
Hit Gene Code At1g48500 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation jasmonate-zim-domain protein 4
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL949411 [GenBank]


Last Updated on 10.06.2021 13:37