SimpleSearch - Line and FST details


Line specific information

 
Line ID 321A06
Vector Used pAC161
Line Availability available as T3 set from NASC (N430726)
Segregation Analysis 50:50:50
Confirmed for Hit At4g34480
Parent of DUPLO pair none
Parent of pair(s) 4828, 95881

Gene hit At4g34480

 
Sequence (A. th genome BLAST matches underlined) 
>41-K015949-022-321-A06-8409
CTGTAGATTTCTTACAACTTTTTATACTAAGTTACTAAGTTGAAACTACTATTGGTATGG
CGTGAAAGTAACGGGGAGAGAAATCTTACTATGACATCCTCCCCATTGATGTAGCTACGC
ATTTACGACTCTTATCTCTCTGTCTAACAAATCACTCTCAAATATCGCGACGGATTTGCA
ACTATTTTCGAACCCTCTCCTGATTATTACGGCTTGATTCTAGGGTAATTAGACTCTACT
TACCTATGGGATCCTCGCTATAGTGAGACTCTTCTTTCTCACATAACCTGGTATGCTTAA
GATTTTCTTCCTATGGGATCCTCCCTCACAGAGAGATAACTCTCCAACACATCGCTCTCT
CTTCTCTCCGATTCGCACTCAAGCGTTTAGCTGACGCTACATATCTCATGGCATTGCTGG
ACTCCCTATGAGATACTCCCCGGTCTAAGCGTATGCAAGCACATATACGATTTACTCTAC
TGGCTTCTGGACCTCGCAGTGCAACACTTCGTATGCTACCCTATAAAGCGAATCCCGACG
TGATAGAGCCATTGAATCTATTAGGATTCACCTGGTTGTAGCCTCTCCGTGGCCTACGCG
ACCATGCGCTTTTAACCCCCTTGGACAGCCTCGCTCATCCTTTTCCCATGGGATCCCCCC
CAATAGGGAGAAGGACTCGCTCCCCCTCTTTCATTTGGCCTACCCCTCATCTCAACGAGG
TCC
GenBank Accession AL949473 [GenBank]
Graphic View Graphic view of gene At4g34480
Predicted Position of Insertion Chr4:16481511 - go to primer design
BLAST e Value 8e-33
Hit Clone Code (BAC ID) T4L20
Hit Gene Code At4g34480 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation O-Glycosyl hydrolases family 17 protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR807851 [GenBank]


Last Updated on 10.06.2021 13:37