SimpleSearch - Line and FST details


Line specific information

 
Line ID 321B08
Vector Used pAC161
Line Availability available as T3 set from NASC (N430740)
Segregation Analysis 50:49:34
Confirmed for Hit At5g61520
Parent of DUPLO pair none
Parent of pair(s) 6157, 6177, 6204, 7751, 7758, 77115, 77116, 77117, 77118, 77119, 77120, 77121, 77122

Gene hit F28N5

 
Sequence (A. th genome BLAST matches underlined) 
>58-K015945-022-321-B08-8409
TATCCTGAAATTTCCCGGACTGAAGCCTTTACATTGAATATATCCTTGATTGACTTGATG
TCATGTAGTATAGATTGAGTATAAGAACTTAAACCGCATCCCGATCTTATAACCTAAGGA
GTGTTTCCTTGCTACGAACATACAAAGCCAAAGACTCATACGGACTTGTGGCTCACACCA
TGAAAGCTTTGAGAAGCTATGGGATCCTCCCTATAGTGAGACACTCAAAAAACACCCAGA
ATGATATATCCTAATTACCAAGAAGTATGTGTAGAACATCTCTCGCCGATGCAGGAGCCG
ATATTGAACCCGCCCTGGGGTGACATGACACATGAAACCCCCCATATAAAGAGATCTTCC
CGCCAGATACTGATTTAGCCATGGCTTCTTTTCTTGCTTCTTCTGCTACCATGTTTACCT
AGAGAAAGATGGAAACTGGAGGGCTCTCTGTCT
GenBank Accession AL949488 [GenBank]
Graphic View Graphic view of sequence AL949488 of line 321B08
Predicted Position of Insertion Chr5:11708380 - go to primer design
BLAST e Value 9e-39
Hit Clone Code (BAC ID) F28N5
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At5g61520

 
Sequence (A. th genome BLAST matches underlined) 
>58-K015949-022-321-B08-8409
GATCCTGTAGATTTCCCGGACATGAAGCCATTTACAATTGAATATATCCTGCATTGAAAG
TCATTGAATATTTACATATGTACATATTTATATAGTTACATGTTTGCATTTATGTTTAGG
TTTAGAGAACCACAACATTTCATTTAAATATTATGAAAAACTAAAATGTTTTCTACTTCA
AAAATATGATTTATTCTTTTTGCAAACGCAAACACAAACACAAACAAAAAAAAGAAAGAA
CATATATATCCTAATTAGCAAGAATATATATGTGAACCTGAAACCCCGATGTCGTAGCCG
AAGATGACACCGCCCATGGCGGCCATGACACATGAAGCCACCACAAAATAAGTAATCTTC
CCGCCAGATACTGATTTAGCCATGGCTTCTTTTCTTGCTTCTTCTGCTACCATGTTTACC
TATGG
GenBank Accession AL949489 [GenBank]
Graphic View Graphic view of gene At5g61520
Predicted Position of Insertion Chr5:24740821 - go to primer design
BLAST e Value 1e-179
Hit Clone Code (BAC ID) K11J9
Hit Gene Code At5g61520 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Major facilitator superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37