SimpleSearch - Line and FST details
Line specific information
| Line ID | 321C09 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N430753) |
| Segregation Analysis | 50:49:39 |
| Confirmed for Hit | At3g61150 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 5263, 5265, 5272, 5278, 74613 |
Gene hit MYN8
| Sequence (A. th genome BLAST matches underlined) | >67-K015949-022-321-C09-8409 TTTCCCGGACTGAAGCCTTTACACACTCCTTGATCATACTCATTGCTCATTGGTTTCTTA TTCATCACTCCTTTTAAACGCAACATATAATTGCCGACACATTGATTATTTCCCTACTCA CGAACTTTCCCTTTTTTTTTTTTTTTTGGGGAACACCGGGAACCGCCCCCAAAAAAAAAA CCCCCCCCCCGGGGGGAACCGGGGAAGGAAAAAAGGGTAAAAAAACAACCCCCATCCCCC CCACCCCATATTGGGGGGTAAAGGGCCGGGGAACCCAAAATATTTTTTCCCCCCCCCCAA GGGGAAAAAAAAACCCGGCCCCTTTTTTTTTTAAAAAAAAACCGGAAAAATTTCCCGGGG GGGGGGGAAAAACCCTTTTAAAAGGGAAAAAATCCCCCCCTAAAAAAAGGGGGGGGGGGA ACCCCTTTTTTTTTTGGGAGGGGCCCTAAGGGGGGGTTTAAAACCCCCCCCAACCAAAAA AAAGGGGGGGGGGGGGGCACCCCCCCCCCCCTTTAAAAAAGGACCCCCCCCCCAGGGGGG CCCTTTGGGGGGAAAAAATCCTTTTTTTTGGGGGGATTAAAAAAAAAGGGGGTTTTGGGC CCAAACCCCTATGGGTGGGGGGAAACGGGTTTTTTTGTGGGAAAAAAAAAGTGGGGGGGG AAAGGGGCCCCCCCACAAAAAAGGGGGCCCCAAAAAAAAAACCCCCTCCC |
| GenBank Accession | AL949504 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:21719138 - go to primer design |
| BLAST e Value | 9e-42 |
| Hit Clone Code (BAC ID) | MYN8 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
Gene hit At3g61150
| Sequence (A. th genome BLAST matches underlined) | >67-K015945-022-321-C09-8409 TGATCTGTNATTTCCCGGACTGAAGCCATTTACATCGTCCCCGGATACAGCTCCTTGGTC ATCGCTTTCATATCCGTTTCTCCCCATCATCCCCTACATCTACTCTGACGACTCACTGAT GATCTCCCCAACTCCCCACGTTTCCACTCTTTTCTCCATTTGTTTGCTGCCAAATTTACA GAGATTATCATAAGTAGTAGAAGAAGAAGAAATCGAAGATTAAAAGAGGAGATAGTGAGC TTACGAGTCCGAGAGAGAGGCCTGAAGAAGAGAAAGGAAGAGACTGAGAAGGAGCAATGG CGGTCGCTTCCGAGCATGGTGTCTACGGCGGAGAAAGAGAAGTGGTTGTTGTACGGAGCA TCAGATAGTAGCTTTGAGGCTCCAGCACCGTCTTCGAGAAAACCGTTGAAATTCCTGAGA TTTTAATAAAGAGGGAAATATTTATTGTAGATAGAAGAAATCCGCTATGGGATCCTCCCT AATACTGAGATCCCAAAAAATAGGGGGGAGGGGGGCCAACCCCCCCCCCCCTAAAATGGG GACCCCCCCCCCCCGGGGGGACATTTCTGGGGGGAAAAAAC |
| GenBank Accession | AL949503 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:22631125 - go to primer design |
| BLAST e Value | 9e-76 |
| Hit Clone Code (BAC ID) | T20K12 |
| Hit Gene Code | At3g61150 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | homeodomain GLABROUS 1 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
|
Last Updated on 10.06.2021 13:37 |
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