SimpleSearch - Line and FST details


Line specific information

 
Line ID 321F04
Vector Used pAC161
Line Availability available as T3 set from NASC (N430784)
Segregation Analysis 50:35:31
Confirmed for Hit At5g44582
Parent of DUPLO pair none
Parent of pair(s) 12256

Gene hit At5g44582

 
Sequence (A. th genome BLAST matches underlined) 
>30-K015949-022-321-F04-8409
GATCCTGTAGATTTCCCGGACATGAAGCCATTTACAATTGAATATATCCTATGAACGACA
CGACGAGCTTCAGTGTTATATATGAGCATGTACTCCAATAATTTATCATGCACAATAGTT
TGAGAACCCCAATGGTTAGCTTTATTATGTGCGCACTATGGGATCCTCCCTATAGTGAGA
NCATTTCGAGTGATTTAGTGCCCCCTTTTGACCCTAGGGGATCCTCCCTACCGGGGGCCG
TGGTGGCGGTGGTAATGGTGTGTCCCTCGGCGTTTCTTACGTTACAGTTGTTATCGACTT
GGTTTTTGGCACTTTTCTACAGAGTACTTGTTCCTCTAAATAGTATGTCGCCGTGTAGAA
ATTACATGCTACTCTCTACTAGTGTGCGCTGCTTTTTTTATTAGGTGGGCGATTGATTAA
TTTGCTTCTAAGTCAGCCTATCGAACAGGTAAGTTCGCATCTATTCATATTATTTATTTT
GCCGACCCTATGGGATCCTCCCTATAGTGAG
GenBank Accession FR807858 [GenBank]
Graphic View Graphic view of gene At5g44582
Predicted Position of Insertion Chr5:17980984 - go to primer design
BLAST e Value 3e-35
Hit Clone Code (BAC ID) K15C23
Hit Gene Code At5g44582 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hypothetical protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit T20K12

 
Sequence (A. th genome BLAST matches underlined) 
>30-K015945-022-321-F04-8409
TATCCTGAAATTTCCCGGACTGAAGCCATTTACAATTGAATATATCCTAAAAACGAAGAC
GAGCTTCAGTGTTATATATAAACATGTACTCCAATAATTTATCATGCAAAATAGTTTAAA
ACCCCAATAATTAGCTTTATTATGTCGCGCTATGGGATCCTCCACTATAGTGAG
GenBank Accession AL949555 [GenBank]
Graphic View Graphic view of sequence AL949555 of line 321F04
Predicted Position of Insertion Chr3:22714216 - go to primer design
BLAST e Value 2e-49
Hit Clone Code (BAC ID) T20K12
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37